Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 IGKV3-31-201ENST00000523109 329 ntBASIC4.4□□□□□ -1.71
FOXC1Q12948 MIR7853-201ENST00000584820 132 ntBASIC4.4□□□□□ -1.71
FOXC1Q12948 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXC1Q12948 BMS1P21-201ENST00000634565 365 ntBASIC4.4□□□□□ -1.71
FOXC1Q12948 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXC1Q12948 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
FOXC1Q12948 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
FOXC1Q12948 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXC1Q12948 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXC1Q12948 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXC1Q12948 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXC1Q12948 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 RNU1-132P-201ENST00000364300 164 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 RNU6-1276P-201ENST00000365372 104 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 RN7SKP17-201ENST00000411242 351 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXC1Q12948 AC012308.1-201ENST00000451232 178 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 SCARNA10-201ENST00000459255 330 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 RPS17P2-201ENST00000461663 408 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 RPS26P55-201ENST00000471178 356 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXC1Q12948 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXC1Q12948 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
FOXC1Q12948 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXC1Q12948 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXC1Q12948 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXC1Q12948 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXC1Q12948 AP005432.1-201ENST00000580891 3485 ntBASIC4.39□□□□□ -1.71
FOXC1Q12948 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXC1Q12948 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXC1Q12948 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXC1Q12948 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXC1Q12948 SNORA27.1-201ENST00000362604 124 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 RNU4-15P-201ENST00000362613 141 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 SNORA70.6-201ENST00000383934 134 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 RNU6-788P-201ENST00000390967 104 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 AC007064.1-201ENST00000412238 351 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXC1Q12948 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 SNORD11-201ENST00000459124 84 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXC1Q12948 ACA59.2-201ENST00000517061 156 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 AC141557.1-201ENST00000540982 400 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
FOXC1Q12948 RNA5SP108-201ENST00000605921 117 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 CR392039.5-201ENST00000623201 510 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 AC138965.3-201ENST00000623875 498 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXC1Q12948 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXC1Q12948 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
FOXC1Q12948 MAPK10-320ENST00000641462 6696 ntBASIC4.38□□□□□ -1.71
FOXC1Q12948 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXC1Q12948 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXC1Q12948 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXC1Q12948 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXC1Q12948 RN7SKP185-201ENST00000362813 326 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 RNU6-335P-201ENST00000364563 113 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 RNU6-1138P-201ENST00000365359 106 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 MIR7-3-201ENST00000384898 110 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 NDUFB4P6-201ENST00000436819 366 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 AC083906.5-201ENST00000503722 328 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXC1Q12948 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
FOXC1Q12948 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 AC000403.1-201ENST00000613696 3585 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXC1Q12948 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXC1Q12948 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXC1Q12948 AL672296.1-201ENST00000427780 2158 ntBASIC4.37□□□□□ -1.71
FOXC1Q12948 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXC1Q12948 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXC1Q12948 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXC1Q12948 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXC1Q12948 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXC1Q12948 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXC1Q12948 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXC1Q12948 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXC1Q12948 Y_RNA.111-201ENST00000363248 100 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 RNU6-1125P-201ENST00000363601 107 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 RNU6-1292P-201ENST00000383856 107 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 MIR449B-201ENST00000384995 97 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 U3.32-201ENST00000408116 212 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 AC073261.1-201ENST00000429409 121 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 AL645939.1-201ENST00000453429 797 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXC1Q12948 AC005921.1-201ENST00000510589 286 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 RNU6-126P-201ENST00000516685 103 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 AC084364.2-201ENST00000546924 395 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXC1Q12948 AC021739.1-201ENST00000559631 174 ntBASIC4.36□□□□□ -1.71
FOXC1Q12948 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXC1Q12948 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms