Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.09□□□□□ -2.4
CPSF1Q10570 KATNBL1P5-201ENST00000605015 517 ntBASIC0.09□□□□□ -2.4
CPSF1Q10570 AC126177.8-201ENST00000618339 1015 ntBASIC0.09□□□□□ -2.4
CPSF1Q10570 MTND4P21-201ENST00000453886 1357 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 SNORD51.1-201ENST00000365405 77 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 RNU6-622P-201ENST00000384272 103 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 RNU1-119P-201ENST00000391122 165 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 RAP1BP3-201ENST00000407180 549 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 COX6CP10-201ENST00000416832 224 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 AC123900.1-201ENST00000420390 96 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.08□□□□□ -2.4
CPSF1Q10570 MTND2P6-201ENST00000455337 1030 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 RPL39P38-201ENST00000467018 153 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 AC121161.1-201ENST00000510606 652 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 RN7SKP12-201ENST00000516275 143 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.08□□□□□ -2.4
CPSF1Q10570 MIR4305-201ENST00000583252 102 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 BNIP3P30-201ENST00000601184 574 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 AC092106.3-201ENST00000611308 722 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 AC087588.2-201ENST00000617667 426 ntBASIC0.08□□□□□ -2.4
CPSF1Q10570 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.08□□□□□ -2.4
CPSF1Q10570 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 RNU6-969P-201ENST00000383900 105 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 SNORA80D-201ENST00000384488 135 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 RNU6-700P-201ENST00000391043 107 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 AF228730.1-201ENST00000397972 663 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 RAC1P6-201ENST00000423911 575 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 AL606662.1-201ENST00000445763 553 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 MTCYBP1-201ENST00000454315 1119 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF1Q10570 RNU6-143P-201ENST00000516942 93 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.07□□□□□ -2.4
CPSF1Q10570 MIR4802-201ENST00000581881 80 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 MIR3976-201ENST00000606807 139 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 AC092656.1-203ENST00000624134 423 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF1Q10570 AC099654.9-201ENST00000637055 678 ntBASIC0.07□□□□□ -2.4
CPSF1Q10570 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF1Q10570 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.06□□□□□ -2.4
CPSF1Q10570 AC245047.7-201ENST00000440265 293 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 MTND1P30-201ENST00000441241 901 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 AC233266.1-201ENST00000454518 96 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.06□□□□□ -2.4
CPSF1Q10570 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.06□□□□□ -2.4
CPSF1Q10570 AC010587.2-201ENST00000511727 448 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 RNU6-1261P-201ENST00000517194 104 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.06□□□□□ -2.4
CPSF1Q10570 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.06□□□□□ -2.4
CPSF1Q10570 AC090330.1-201ENST00000588646 764 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 AC242852.1-201ENST00000612151 96 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 AL357080.1-201ENST00000617394 239 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 AC244015.1-201ENST00000622301 99 ntBASIC0.06□□□□□ -2.4
CPSF1Q10570 Y_RNA.25-201ENST00000362528 102 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 Y_RNA.363-201ENST00000365529 113 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 Y_RNA.390-201ENST00000383932 102 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 RNU6-1207P-201ENST00000384343 107 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 MRPS36P1-201ENST00000421291 307 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 MTCO3P29-201ENST00000432119 779 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 RSL24D1P8-201ENST00000434442 492 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 FABP5P4-201ENST00000437203 171 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 AC024589.1-201ENST00000512207 263 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.05□□□□□ -2.4
CPSF1Q10570 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CPSF1Q10570 AL391001.1-201ENST00000602747 715 ntBASIC0.05□□□□□ -2.4
CPSF1Q10570 MIR411-201ENST00000362239 96 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 RNU6-1123P-201ENST00000362347 106 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 RNU6-862P-201ENST00000362804 105 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 MIR1265-201ENST00000408444 86 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC069257.2-201ENST00000441819 155 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF1Q10570 AC108740.1-201ENST00000498629 225 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC114981.1-201ENST00000503897 678 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF1Q10570 SNORA31.3-201ENST00000516029 96 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 SNORA31.19-201ENST00000517079 126 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 SUMO2P16-201ENST00000519475 264 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 BNIP3P6-201ENST00000549284 499 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.04□□□□□ -2.4
CPSF1Q10570 AC098483.2-201ENST00000603158 454 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF1Q10570 AL360219.1-201ENST00000610230 366 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC021506.2-201ENST00000612354 169 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 PCMTD1P7-201ENST00000634506 357 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 Y_RNA.60-201ENST00000362831 98 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 U3.9-201ENST00000363823 204 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 RNU6-950P-201ENST00000384651 107 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 RNA5SP390-201ENST00000410191 113 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 ELOCP9-201ENST00000418624 239 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC004854.1-201ENST00000440356 349 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC073910.1-201ENST00000445047 438 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF1Q10570 RNU7-140P-201ENST00000459546 60 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 AC104982.1-201ENST00000478775 574 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF1Q10570 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF1Q10570 AC012414.2-201ENST00000559474 187 ntBASIC0.04□□□□□ -2.4
CPSF1Q10570 MIR4709-201ENST00000577272 72 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms