Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 EI24P2-201ENST00000397776 1076 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 RNA5SP120-201ENST00000410900 112 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 HMGB3P2-201ENST00000411913 584 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.68□□□□□ -1.82
SSRP1Q08945 AC114482.1-201ENST00000418010 247 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 RPL21P40-201ENST00000428586 483 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 RN7SL601P-201ENST00000471221 293 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.68□□□□□ -1.82
SSRP1Q08945 ANXA2P1-201ENST00000505539 926 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 RN7SKP272-201ENST00000516988 232 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSRP1Q08945 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.68□□□□□ -1.82
SSRP1Q08945 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.68□□□□□ -1.82
SSRP1Q08945 uc_338.14-201ENST00000613162 166 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 AC110079.1-202ENST00000635213 138 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSRP1Q08945 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.67□□□□□ -1.82
SSRP1Q08945 RNU6-212P-201ENST00000362642 104 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 Y_RNA.106-201ENST00000363189 100 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 Y_RNA.144-201ENST00000363521 113 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 Y_RNA.153-201ENST00000363615 91 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 RNA5SP139-201ENST00000364340 117 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 U3.13-201ENST00000364804 214 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 Y_RNA.358-201ENST00000365491 99 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 SNORA36A-201ENST00000384221 132 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 MIR491-201ENST00000384877 84 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 U3.19-201ENST00000390893 196 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 DPH3P2-201ENST00000422618 250 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 AC009414.1-201ENST00000427200 443 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 AC006028.1-201ENST00000438379 402 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.67□□□□□ -1.82
SSRP1Q08945 MTCO3P8-201ENST00000453691 755 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 MTATP8P1-201ENST00000467115 207 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.67□□□□□ -1.82
SSRP1Q08945 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.67□□□□□ -1.82
SSRP1Q08945 AC109329.1-201ENST00000518744 317 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.67□□□□□ -1.82
SSRP1Q08945 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.67□□□□□ -1.82
SSRP1Q08945 AL137843.1-201ENST00000605078 385 ntBASIC3.67□□□□□ -1.82
SSRP1Q08945 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.67□□□□□ -1.82
SSRP1Q08945 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.67□□□□□ -1.82
SSRP1Q08945 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SSRP1Q08945 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSRP1Q08945 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SSRP1Q08945 AC091564.4-201ENST00000533934 2194 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSRP1Q08945 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSRP1Q08945 MIR1252-201ENST00000408861 65 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.66□□□□□ -1.82
SSRP1Q08945 AL590135.1-201ENST00000422215 156 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AC019205.3-201ENST00000424573 156 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AL353705.1-201ENST00000433468 480 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AC016700.2-201ENST00000446011 156 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 U8.20-201ENST00000459445 131 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AC109925.1-201ENST00000478069 331 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.66□□□□□ -1.82
SSRP1Q08945 Y_RNA.715-201ENST00000517082 110 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 MIR2355-201ENST00000517199 87 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 SNORA70.24-201ENST00000517233 118 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.66□□□□□ -1.82
SSRP1Q08945 AC090617.3-201ENST00000573670 475 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 MIR5680-201ENST00000577577 84 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 MIR3136-201ENST00000583498 78 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.66□□□□□ -1.82
SSRP1Q08945 AL355297.3-201ENST00000604082 446 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 AP000942.4-201ENST00000604811 241 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 MIR7112-201ENST00000616126 65 ntBASIC3.66□□□□□ -1.82
SSRP1Q08945 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSRP1Q08945 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSRP1Q08945 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.66□□□□□ -1.82
SSRP1Q08945 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SSRP1Q08945 RNU6-805P-201ENST00000365643 106 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 SNORA51.11-201ENST00000384442 131 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 RNU4-47P-201ENST00000410876 114 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.65□□□□□ -1.83
SSRP1Q08945 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.65□□□□□ -1.83
SSRP1Q08945 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.65□□□□□ -1.83
SSRP1Q08945 snoU13.14-201ENST00000459372 104 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 RN7SL863P-201ENST00000462370 296 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 AC090525.1-201ENST00000479116 478 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.65□□□□□ -1.83
SSRP1Q08945 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.65□□□□□ -1.83
SSRP1Q08945 RNU6-567P-201ENST00000516746 107 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSRP1Q08945 MIR3200-201ENST00000580767 85 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.65□□□□□ -1.83
SSRP1Q08945 RPS29P30-201ENST00000600975 111 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 AC018692.3-201ENST00000623929 123 ntBASIC3.65□□□□□ -1.83
SSRP1Q08945 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSRP1Q08945 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSRP1Q08945 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.65□□□□□ -1.83
SSRP1Q08945 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
SSRP1Q08945 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.65□□□□□ -1.83
SSRP1Q08945 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.65□□□□□ -1.83
SSRP1Q08945 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SSRP1Q08945 AC073346.2-201ENST00000624724 2058 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 AL109809.4-201ENST00000603520 2185 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 Y_RNA.152-201ENST00000363578 100 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 RNU4-50P-201ENST00000364361 141 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 SNORA63.7-201ENST00000365579 123 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms