Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MTCO2P8-201ENST00000412213 658 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.78□□□□□ -2.53
TFF3Q07654 AC104073.1-201ENST00000451988 151 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.78□□□□□ -2.53
TFF3Q07654 AC104136.1-201ENST00000512969 394 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 RNA5SP291-201ENST00000517222 105 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.78□□□□□ -2.53
TFF3Q07654 AL355297.3-201ENST00000604082 446 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 AC092634.7-201ENST00000621022 103 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 U2.21-201ENST00000637295 81 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.78□□□□□ -2.53
TFF3Q07654 RNU2-43P-201ENST00000410306 190 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 RNU2-33P-201ENST00000410344 192 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 BUD31P2-201ENST00000449374 300 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 RPS27AP8-201ENST00000452665 445 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 RPS29P15-201ENST00000458329 171 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 AC112771.1-201ENST00000463581 102 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 SNORA70.12-201ENST00000516084 153 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 LSM6P2-201ENST00000552208 177 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 MIR3681-201ENST00000580089 72 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 BNIP3P31-201ENST00000604515 566 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 AC130454.1-201ENST00000622948 401 ntBASIC-0.79□□□□□ -2.54
TFF3Q07654 RNU6-756P-201ENST00000383997 107 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 RNU6-452P-201ENST00000384406 107 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 RNU6-735P-201ENST00000410612 107 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 USP9YP19-201ENST00000412165 485 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 USP9YP13-201ENST00000417797 480 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 SKA2P1-201ENST00000425592 390 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 MTND5P2-201ENST00000442927 1142 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.8□□□□□ -2.54
TFF3Q07654 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.8□□□□□ -2.54
TFF3Q07654 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.8□□□□□ -2.54
TFF3Q07654 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.8□□□□□ -2.54
TFF3Q07654 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.8□□□□□ -2.54
TFF3Q07654 RPL23AP91-201ENST00000569211 455 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 AC126365.2-201ENST00000580630 379 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 AC010809.3-201ENST00000621310 641 ntBASIC-0.8□□□□□ -2.54
TFF3Q07654 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.8□□□□□ -2.54
TFF3Q07654 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 RNY4P24-201ENST00000362735 96 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 RNU6-778P-201ENST00000363269 103 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 SNORD115-41-201ENST00000363608 82 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 RNU4-84P-201ENST00000364200 139 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 SNORA63D-201ENST00000364359 132 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 RNU6-898P-201ENST00000365627 104 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 RNU1-39P-201ENST00000383897 165 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 SNORD116-13-201ENST00000384408 92 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 RNA5SP504-201ENST00000410676 117 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 SNORA40.8-201ENST00000411034 126 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-0.81□□□□□ -2.54
TFF3Q07654 AL512637.2-201ENST00000431287 1256 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.81□□□□□ -2.54
TFF3Q07654 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.81□□□□□ -2.54
TFF3Q07654 AC093259.1-201ENST00000509755 300 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.81□□□□□ -2.54
TFF3Q07654 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
TFF3Q07654 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.81□□□□□ -2.54
TFF3Q07654 AL590229.1-201ENST00000603497 542 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 AL121992.2-201ENST00000606262 256 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 AC008147.4-201ENST00000617570 1204 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 AC136475.10-201ENST00000620253 385 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 AC004009.2-201ENST00000623016 728 ntBASIC-0.81□□□□□ -2.54
TFF3Q07654 SNORD71-201ENST00000411292 86 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC011233.1-201ENST00000422812 283 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC092001.1-201ENST00000453012 261 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 snoU13.27-201ENST00000459278 104 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC010460.2-201ENST00000509054 677 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC022483.1-201ENST00000514020 567 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 RNU6-27P-201ENST00000516146 107 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 RNU1-117P-201ENST00000517041 158 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC018630.3-201ENST00000542637 96 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AL442163.3-201ENST00000554110 156 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.82□□□□□ -2.54
TFF3Q07654 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC018926.1-201ENST00000616335 435 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 MTND1P37-201ENST00000636562 264 ntBASIC-0.82□□□□□ -2.54
TFF3Q07654 AC010615.1-201ENST00000594254 1764 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.83□□□□□ -2.54
TFF3Q07654 SNORD51-201ENST00000384320 80 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 AC003071.1-201ENST00000451219 789 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 RNU1-131P-201ENST00000458943 161 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 AC091021.1-201ENST00000468051 388 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.83□□□□□ -2.54
TFF3Q07654 AC005021.1-201ENST00000608730 355 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 AC004908.3-201ENST00000610248 625 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 AC116165.2-201ENST00000616705 206 ntBASIC-0.83□□□□□ -2.54
TFF3Q07654 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.84□□□□□ -2.54
TFF3Q07654 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 RNU6-331P-201ENST00000384724 107 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 SNX3P1X-201ENST00000414887 175 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 GTF2IP3-201ENST00000433887 494 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 RPL23AP50-201ENST00000434149 455 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 MTCO3P10-201ENST00000455912 772 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms