Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 snoU13.18-201ENST00000459483 104 ntBASIC1.88□□□□□ -2.11
CSTF1Q05048 ARL2BPP4-201ENST00000506854 471 ntBASIC1.88□□□□□ -2.11
CSTF1Q05048 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.88□□□□□ -2.11
CSTF1Q05048 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CSTF1Q05048 AC104136.1-201ENST00000512969 394 ntBASIC1.88□□□□□ -2.11
CSTF1Q05048 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
CSTF1Q05048 AC107304.1-201ENST00000604229 296 ntBASIC1.88□□□□□ -2.11
CSTF1Q05048 AC072046.2-201ENST00000618366 268 ntBASIC1.88□□□□□ -2.11
CSTF1Q05048 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CSTF1Q05048 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CSTF1Q05048 RNU6-944P-201ENST00000364023 107 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 RNU4-91P-201ENST00000364778 135 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 RNU4-48P-201ENST00000365559 182 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CSTF1Q05048 SNORA67.5-201ENST00000391036 107 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 RNU2-3P-201ENST00000410144 191 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 AL030996.1-201ENST00000411430 235 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.87□□□□□ -2.11
CSTF1Q05048 PIGFP2-201ENST00000421400 651 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.87□□□□□ -2.11
CSTF1Q05048 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
CSTF1Q05048 AL353752.1-201ENST00000454946 260 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.87□□□□□ -2.11
CSTF1Q05048 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.87□□□□□ -2.11
CSTF1Q05048 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CSTF1Q05048 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.87□□□□□ -2.11
CSTF1Q05048 RNU6-250P-201ENST00000516958 103 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 DNAJC19P9-201ENST00000555084 351 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
CSTF1Q05048 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 NBR2-204ENST00000587322 63 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 SNRPGP17-201ENST00000603780 214 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 AC005034.5-201ENST00000604219 466 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CSTF1Q05048 Z99129.1-201ENST00000612510 255 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 RMST_4.1-201ENST00000616886 107 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 RMST_7.1-201ENST00000621935 268 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.87□□□□□ -2.11
CSTF1Q05048 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
CSTF1Q05048 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CSTF1Q05048 AC008555.8-201ENST00000623602 2168 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.86□□□□□ -2.11
CSTF1Q05048 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSTF1Q05048 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.86□□□□□ -2.11
CSTF1Q05048 Y_RNA.194-201ENST00000363985 102 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 SNORD116-4-201ENST00000384733 96 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CSTF1Q05048 SNORA40.19-201ENST00000390846 128 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 SNORD70.1-201ENST00000391007 85 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 RNU2-66P-201ENST00000410650 161 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.86□□□□□ -2.11
CSTF1Q05048 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AL590556.1-201ENST00000423231 483 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.86□□□□□ -2.11
CSTF1Q05048 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.86□□□□□ -2.11
CSTF1Q05048 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.86□□□□□ -2.11
CSTF1Q05048 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.86□□□□□ -2.11
CSTF1Q05048 C1DP4-201ENST00000455429 424 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AC022364.2-201ENST00000457963 554 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.86□□□□□ -2.11
CSTF1Q05048 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.86□□□□□ -2.11
CSTF1Q05048 RNU6-377P-201ENST00000515965 102 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 RNA5SP490-201ENST00000517141 136 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 CYCSP27-201ENST00000527643 293 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AC087441.2-201ENST00000529141 262 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 AC146944.4-201ENST00000602697 718 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.86□□□□□ -2.11
CSTF1Q05048 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CSTF1Q05048 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.85□□□□□ -2.11
CSTF1Q05048 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSTF1Q05048 Y_RNA.381-201ENST00000365666 102 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 RNU6-393P-201ENST00000384475 107 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 BTF3L4P2-201ENST00000392798 346 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AC068050.1-201ENST00000394891 380 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 CBX3P9-201ENST00000402326 552 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 Y_RNA.597-201ENST00000410463 100 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 RNU4-46P-201ENST00000410818 138 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.85□□□□□ -2.11
CSTF1Q05048 PRPS1P1-201ENST00000445305 876 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AL031274.1-201ENST00000450334 232 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 RPL23AP3-201ENST00000453844 468 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.85□□□□□ -2.11
CSTF1Q05048 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.85□□□□□ -2.11
CSTF1Q05048 MTCYBP40-201ENST00000509390 1135 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 SNORD27.1-201ENST00000516319 72 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSTF1Q05048 NDUFA5P6-201ENST00000542110 379 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.85□□□□□ -2.11
CSTF1Q05048 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.85□□□□□ -2.11
CSTF1Q05048 AL391840.1-201ENST00000571144 367 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 MIR4703-201ENST00000577728 79 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms