Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RPS27P1-201ENST00000450552 247 ntBASIC0.64□□□□□ -2.31
CCL20P78556 AC016925.1-201ENST00000458303 298 ntBASIC0.64□□□□□ -2.31
CCL20P78556 AC098799.1-201ENST00000504752 800 ntBASIC0.64□□□□□ -2.31
CCL20P78556 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
CCL20P78556 SCARNA16.2-201ENST00000516520 172 ntBASIC0.64□□□□□ -2.31
CCL20P78556 RNU5F-4P-201ENST00000516581 114 ntBASIC0.64□□□□□ -2.31
CCL20P78556 RNU6-1098P-201ENST00000516772 96 ntBASIC0.64□□□□□ -2.31
CCL20P78556 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL20P78556 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.64□□□□□ -2.31
CCL20P78556 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL20P78556 CBX3P8-201ENST00000532412 525 ntBASIC0.64□□□□□ -2.31
CCL20P78556 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL20P78556 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL20P78556 MIR4709-201ENST00000577272 72 ntBASIC0.64□□□□□ -2.31
CCL20P78556 AC008088.1-201ENST00000580993 280 ntBASIC0.64□□□□□ -2.31
CCL20P78556 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL20P78556 AC106800.4-201ENST00000614905 153 ntBASIC0.64□□□□□ -2.31
CCL20P78556 AL138960.2-201ENST00000625145 535 ntBASIC0.64□□□□□ -2.31
CCL20P78556 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.64□□□□□ -2.31
CCL20P78556 MTND4P14-201ENST00000435799 1354 ntBASIC0.63□□□□□ -2.31
CCL20P78556 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCL20P78556 Y_RNA.97-201ENST00000363094 102 ntBASIC0.63□□□□□ -2.31
CCL20P78556 RNU6-1141P-201ENST00000364520 107 ntBASIC0.63□□□□□ -2.31
CCL20P78556 SNORA4.2-201ENST00000365313 147 ntBASIC0.63□□□□□ -2.31
CCL20P78556 RNU6-641P-201ENST00000384006 107 ntBASIC0.63□□□□□ -2.31
CCL20P78556 RNU6-39P-201ENST00000384344 107 ntBASIC0.63□□□□□ -2.31
CCL20P78556 RNU6-1026P-201ENST00000384465 108 ntBASIC0.63□□□□□ -2.31
CCL20P78556 SNORA11-201ENST00000408789 128 ntBASIC0.63□□□□□ -2.31
CCL20P78556 RNU6-293P-201ENST00000411259 106 ntBASIC0.63□□□□□ -2.31
CCL20P78556 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
CCL20P78556 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.63□□□□□ -2.31
CCL20P78556 USP9YP14-201ENST00000430663 563 ntBASIC0.63□□□□□ -2.31
CCL20P78556 AC000111.3-201ENST00000433478 193 ntBASIC0.63□□□□□ -2.31
CCL20P78556 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.63□□□□□ -2.31
CCL20P78556 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.63□□□□□ -2.31
CCL20P78556 AC007395.1-201ENST00000451333 677 ntBASIC0.63□□□□□ -2.31
CCL20P78556 RNU7-34P-201ENST00000459394 64 ntBASIC0.63□□□□□ -2.31
CCL20P78556 AL442163.3-201ENST00000554110 156 ntBASIC0.63□□□□□ -2.31
CCL20P78556 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.63□□□□□ -2.31
CCL20P78556 ZNF519P3-201ENST00000557158 1032 ntBASIC0.63□□□□□ -2.31
CCL20P78556 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.63□□□□□ -2.31
CCL20P78556 AC008521.1-201ENST00000587471 187 ntBASIC0.63□□□□□ -2.31
CCL20P78556 AC073539.2-201ENST00000597113 165 ntBASIC0.63□□□□□ -2.31
CCL20P78556 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.63□□□□□ -2.31
CCL20P78556 AL157834.3-201ENST00000615543 103 ntBASIC0.63□□□□□ -2.31
CCL20P78556 Z69720.2-201ENST00000624755 279 ntBASIC0.63□□□□□ -2.31
CCL20P78556 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
CCL20P78556 RNU4-92P-201ENST00000363783 136 ntBASIC0.62□□□□□ -2.31
CCL20P78556 U3.9-201ENST00000363823 204 ntBASIC0.62□□□□□ -2.31
CCL20P78556 Y_RNA.302-201ENST00000364997 102 ntBASIC0.62□□□□□ -2.31
CCL20P78556 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
CCL20P78556 RNU6-692P-201ENST00000384496 107 ntBASIC0.62□□□□□ -2.31
CCL20P78556 AL117342.1-201ENST00000404861 406 ntBASIC0.62□□□□□ -2.31
CCL20P78556 RNU2-3P-201ENST00000410144 191 ntBASIC0.62□□□□□ -2.31
CCL20P78556 RNA5SP201-201ENST00000410316 124 ntBASIC0.62□□□□□ -2.31
CCL20P78556 OOSP1P1-201ENST00000423265 274 ntBASIC0.62□□□□□ -2.31
CCL20P78556 AC010099.3-201ENST00000423896 409 ntBASIC0.62□□□□□ -2.31
CCL20P78556 AC137499.1-201ENST00000427602 88 ntBASIC0.62□□□□□ -2.31
CCL20P78556 AC010975.2-201ENST00000427781 588 ntBASIC0.62□□□□□ -2.31
CCL20P78556 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.62□□□□□ -2.31
CCL20P78556 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.62□□□□□ -2.31
CCL20P78556 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.62□□□□□ -2.31
CCL20P78556 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.62□□□□□ -2.31
CCL20P78556 AC117522.1-201ENST00000509821 380 ntBASIC0.62□□□□□ -2.31
CCL20P78556 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.62□□□□□ -2.31
CCL20P78556 AC105185.1-201ENST00000518705 535 ntBASIC0.62□□□□□ -2.31
CCL20P78556 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CCL20P78556 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.62□□□□□ -2.31
CCL20P78556 MIR3923-201ENST00000579521 83 ntBASIC0.62□□□□□ -2.31
CCL20P78556 AC211469.2-201ENST00000605461 205 ntBASIC0.62□□□□□ -2.31
CCL20P78556 MIR6078-201ENST00000611069 100 ntBASIC0.62□□□□□ -2.31
CCL20P78556 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.62□□□□□ -2.31
CCL20P78556 AC008147.4-201ENST00000617570 1204 ntBASIC0.62□□□□□ -2.31
CCL20P78556 AL359740.1-201ENST00000624340 592 ntBASIC0.62□□□□□ -2.31
CCL20P78556 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.62□□□□□ -2.31
CCL20P78556 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.61□□□□□ -2.31
CCL20P78556 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CCL20P78556 RNU6-877P-201ENST00000383868 107 ntBASIC0.61□□□□□ -2.31
CCL20P78556 MIR532-201ENST00000385025 91 ntBASIC0.61□□□□□ -2.31
CCL20P78556 MIR1289-2-201ENST00000408360 111 ntBASIC0.61□□□□□ -2.31
CCL20P78556 RNU2-39P-201ENST00000410604 198 ntBASIC0.61□□□□□ -2.31
CCL20P78556 AP1B1P2-201ENST00000416196 106 ntBASIC0.61□□□□□ -2.31
CCL20P78556 HIGD1AP15-201ENST00000416198 280 ntBASIC0.61□□□□□ -2.31
CCL20P78556 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.61□□□□□ -2.31
CCL20P78556 PIGFP2-201ENST00000421400 651 ntBASIC0.61□□□□□ -2.31
CCL20P78556 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.61□□□□□ -2.31
CCL20P78556 AC119618.1-201ENST00000434191 222 ntBASIC0.61□□□□□ -2.31
CCL20P78556 RPS24P1-201ENST00000438550 371 ntBASIC0.61□□□□□ -2.31
CCL20P78556 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.61□□□□□ -2.31
CCL20P78556 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.61□□□□□ -2.31
CCL20P78556 RNU7-95P-201ENST00000459222 64 ntBASIC0.61□□□□□ -2.31
CCL20P78556 AL163973.1-201ENST00000484753 577 ntBASIC0.61□□□□□ -2.31
CCL20P78556 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.61□□□□□ -2.31
CCL20P78556 RNU6-377P-201ENST00000515965 102 ntBASIC0.61□□□□□ -2.31
CCL20P78556 RNU6-548P-201ENST00000517083 115 ntBASIC0.61□□□□□ -2.31
CCL20P78556 SNORA70.22-201ENST00000517160 124 ntBASIC0.61□□□□□ -2.31
CCL20P78556 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.61□□□□□ -2.31
CCL20P78556 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.61□□□□□ -2.31
CCL20P78556 BNIP3P22-201ENST00000593399 556 ntBASIC0.61□□□□□ -2.31
CCL20P78556 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms