Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-601P-201ENST00000384540 107 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 MIR181A2-201ENST00000384863 110 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 AL139095.1-201ENST00000404326 391 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 RNU4-14P-201ENST00000410858 122 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CL1P78423 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CL1P78423 EIF1AXP1-201ENST00000419267 435 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CL1P78423 AL139132.1-201ENST00000431587 344 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CL1P78423 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CX3CL1P78423 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CL1P78423 AP000705.1-201ENST00000454567 350 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 SNORD5.1-201ENST00000458800 75 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.24□□□□□ -2.05
CX3CL1P78423 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CL1P78423 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.24□□□□□ -2.05
CX3CL1P78423 AC026782.1-201ENST00000512952 449 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 AC021231.3-201ENST00000558497 370 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 AL078605.1-201ENST00000603529 500 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 AL138963.2-201ENST00000605137 226 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 AC018462.2-201ENST00000605375 395 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 Y_RNA.804-201ENST00000615262 101 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 MIR5739-201ENST00000619803 80 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CX3CL1P78423 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CL1P78423 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CX3CL1P78423 AC135776.4-201ENST00000624300 1904 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CX3CL1P78423 SNORD50.1-201ENST00000362987 71 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 RNU1-109P-201ENST00000383960 147 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 RNU6-1274P-201ENST00000384557 107 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 RNU6-1072P-201ENST00000384703 107 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 RNU6-443P-201ENST00000384780 107 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.23□□□□□ -2.05
CX3CL1P78423 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.23□□□□□ -2.05
CX3CL1P78423 AC079354.2-201ENST00000453523 154 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 RPS3P1-201ENST00000456781 192 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.23□□□□□ -2.05
CX3CL1P78423 RNU7-26P-201ENST00000458980 63 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 Y_RNA.635-201ENST00000459041 101 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AC103975.1-201ENST00000482506 483 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.23□□□□□ -2.05
CX3CL1P78423 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.23□□□□□ -2.05
CX3CL1P78423 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.23□□□□□ -2.05
CX3CL1P78423 RNU6-586P-201ENST00000517265 104 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.23□□□□□ -2.05
CX3CL1P78423 CBX3P7-201ENST00000532876 502 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 MRPS36P4-201ENST00000534436 298 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.23□□□□□ -2.05
CX3CL1P78423 AC109446.1-201ENST00000566172 220 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 ZNF861P-201ENST00000588126 639 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 Z98751.3-201ENST00000604447 521 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 AC099654.5-201ENST00000636479 350 ntBASIC2.23□□□□□ -2.05
CX3CL1P78423 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.22□□□□□ -2.05
CX3CL1P78423 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CX3CL1P78423 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CX3CL1P78423 RNU4-15P-201ENST00000362613 141 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 Y_RNA.263-201ENST00000364659 114 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 RNU6-1286P-201ENST00000383871 107 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 RNU6-142P-201ENST00000384019 107 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 RNU6-968P-201ENST00000384076 107 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 RNU6-842P-201ENST00000384269 107 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 Y_RNA.482-201ENST00000384377 111 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 MIR95-201ENST00000385072 81 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 Y_RNA.594-201ENST00000410373 140 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 RNU2-63P-201ENST00000410792 194 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.22□□□□□ -2.05
CX3CL1P78423 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.22□□□□□ -2.05
CX3CL1P78423 AC236972.1-201ENST00000433225 199 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 RPL23AP83-201ENST00000434984 473 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AL161788.1-201ENST00000441805 169 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC093019.1-201ENST00000443135 252 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.22□□□□□ -2.05
CX3CL1P78423 CYP2C59P-201ENST00000457790 269 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 CKS1BP2-201ENST00000497342 240 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.22□□□□□ -2.05
CX3CL1P78423 RNU6-277P-201ENST00000516272 106 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 SNORA9.3-201ENST00000516383 129 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 SNORA74D-201ENST00000516404 141 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 RPPH1-2P-201ENST00000516688 293 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC109329.2-201ENST00000519658 482 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC016256.1-201ENST00000547971 354 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.22□□□□□ -2.05
CX3CL1P78423 FGF7P1-201ENST00000582820 288 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 MIR3605-201ENST00000583214 100 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.22□□□□□ -2.05
CX3CL1P78423 AC011494.1-201ENST00000596454 237 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC016727.1-205ENST00000605437 569 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AL132765.2-201ENST00000610812 351 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC009318.2-201ENST00000610917 651 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AC025253.1-201ENST00000613623 543 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 HMGB1P24-202ENST00000615653 685 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AL449363.1-201ENST00000617815 186 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AL359757.2-201ENST00000624309 274 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AL008636.1-201ENST00000625038 1018 ntBASIC2.22□□□□□ -2.05
CX3CL1P78423 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.22□□□□□ -2.05
CX3CL1P78423 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms