Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIR3923-201ENST00000579521 83 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 AC060766.3-201ENST00000591442 263 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 AC064836.2-201ENST00000609491 462 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 AL136221.1-201ENST00000621449 509 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDL3P58872 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RHBDL3P58872 AC009541.1-201ENST00000438279 2662 ntBASIC2.96□□□□□ -1.93
RHBDL3P58872 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RHBDL3P58872 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RHBDL3P58872 SNORA70B-201ENST00000384210 135 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 RNU6-611P-201ENST00000384276 104 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 SNORA40.19-201ENST00000390846 128 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AL591034.2-201ENST00000402839 359 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.96□□□□□ -1.94
RHBDL3P58872 AL645568.3-201ENST00000433683 316 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.96□□□□□ -1.94
RHBDL3P58872 RN7SL297P-201ENST00000483161 293 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AC104564.1-201ENST00000493028 407 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AC096745.1-201ENST00000509945 370 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 FAM206BP-201ENST00000510179 541 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AC025465.4-201ENST00000513422 638 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 NDUFA5P6-201ENST00000542110 379 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 TRAV32-201ENST00000553993 340 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AC009127.3-201ENST00000570531 403 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 MTCO3P13-201ENST00000577757 781 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 SNRPGP17-201ENST00000603780 214 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AC104237.2-201ENST00000612456 443 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AL161423.1-201ENST00000613700 262 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 FAM157A-202ENST00000615155 405 ntBASIC2.96□□□□□ -1.94
RHBDL3P58872 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.96□□□□□ -1.94
RHBDL3P58872 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RHBDL3P58872 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.96□□□□□ -1.94
RHBDL3P58872 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
RHBDL3P58872 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RHBDL3P58872 RNA5SP456-201ENST00000364002 114 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 Y_RNA.504-201ENST00000384481 104 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 MIR548F1-201ENST00000408667 84 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 Y_RNA.597-201ENST00000410463 100 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.95□□□□□ -1.94
RHBDL3P58872 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.95□□□□□ -1.94
RHBDL3P58872 GPM6BP3-201ENST00000442797 145 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.95□□□□□ -1.94
RHBDL3P58872 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.95□□□□□ -1.94
RHBDL3P58872 RNA5SP137-201ENST00000516833 135 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.95□□□□□ -1.94
RHBDL3P58872 AC023043.3-201ENST00000593113 385 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.95□□□□□ -1.94
RHBDL3P58872 AC104458.1-201ENST00000608243 463 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 MIR3662-201ENST00000637030 95 ntBASIC2.95□□□□□ -1.94
RHBDL3P58872 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RHBDL3P58872 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RHBDL3P58872 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RHBDL3P58872 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RHBDL3P58872 ZNF658B-202ENST00000615961 3375 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 Y_RNA.414-201ENST00000384011 101 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 MIR1294-201ENST00000408503 142 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 RNU4-53P-201ENST00000410828 140 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 VN1R36P-201ENST00000414936 291 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 EDDM3CP-201ENST00000415977 425 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 AL121890.1-201ENST00000435457 205 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 AC245102.2-201ENST00000448956 180 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.94□□□□□ -1.94
RHBDL3P58872 RN7SL636P-201ENST00000497504 294 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 AC092436.3-201ENST00000511788 257 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 AC011352.1-201ENST00000512300 793 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.94□□□□□ -1.94
RHBDL3P58872 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.94□□□□□ -1.94
RHBDL3P58872 AC104984.5-201ENST00000586878 94 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 AC078899.2-201ENST00000595282 212 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 U6atac.1-201ENST00000616025 117 ntBASIC2.94□□□□□ -1.94
RHBDL3P58872 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.94□□□□□ -1.94
RHBDL3P58872 AC016717.2-201ENST00000609089 5141 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 RNU6-1013P-201ENST00000384180 107 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RHBDL3P58872 AL030996.1-201ENST00000411430 235 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.93□□□□□ -1.94
RHBDL3P58872 C8orf59P1-201ENST00000429930 303 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 MTND1P4-201ENST00000435196 415 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 AC018868.1-201ENST00000491307 315 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.93□□□□□ -1.94
RHBDL3P58872 AC234781.5-201ENST00000508429 271 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.93□□□□□ -1.94
RHBDL3P58872 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.93□□□□□ -1.94
RHBDL3P58872 SNORA4.4-201ENST00000515921 135 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 RNU6-667P-201ENST00000517186 102 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 CTHRC1P1-201ENST00000605383 469 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 AC103810.6-201ENST00000606708 136 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 AC009033.1-201ENST00000624279 431 ntBASIC2.93□□□□□ -1.94
RHBDL3P58872 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.92□□□□□ -1.94
RHBDL3P58872 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RHBDL3P58872 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RHBDL3P58872 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RHBDL3P58872 Y_RNA.505-201ENST00000384489 102 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RHBDL3P58872 SNORD88.1-201ENST00000408684 91 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 Z98742.3-201ENST00000418637 326 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.92□□□□□ -1.94
RHBDL3P58872 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.92□□□□□ -1.94
RHBDL3P58872 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms