Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DUXAP5-201ENST00000529668 529 ntBASIC1.47□□□□□ -2.17
VSX2P58304 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.47□□□□□ -2.17
VSX2P58304 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.47□□□□□ -2.17
VSX2P58304 AC015720.1-201ENST00000565251 277 ntBASIC1.47□□□□□ -2.17
VSX2P58304 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.47□□□□□ -2.17
VSX2P58304 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
VSX2P58304 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
VSX2P58304 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.47□□□□□ -2.17
VSX2P58304 SEPT14P19-203ENST00000633205 211 ntBASIC1.47□□□□□ -2.17
VSX2P58304 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VSX2P58304 FGF7P2-201ENST00000332473 296 ntBASIC1.46□□□□□ -2.18
VSX2P58304 Y_RNA.4-201ENST00000362333 112 ntBASIC1.46□□□□□ -2.18
VSX2P58304 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
VSX2P58304 RNU6-336P-201ENST00000364891 107 ntBASIC1.46□□□□□ -2.18
VSX2P58304 RNU6-456P-201ENST00000384493 107 ntBASIC1.46□□□□□ -2.18
VSX2P58304 RNU6-1222P-201ENST00000384615 107 ntBASIC1.46□□□□□ -2.18
VSX2P58304 MIR29B2-201ENST00000385055 81 ntBASIC1.46□□□□□ -2.18
VSX2P58304 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
VSX2P58304 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.46□□□□□ -2.18
VSX2P58304 SNORA16.2-201ENST00000390991 127 ntBASIC1.46□□□□□ -2.18
VSX2P58304 AP1B1P2-201ENST00000416196 106 ntBASIC1.46□□□□□ -2.18
VSX2P58304 AC244505.5-201ENST00000443639 207 ntBASIC1.46□□□□□ -2.18
VSX2P58304 AMD1P1-201ENST00000457220 922 ntBASIC1.46□□□□□ -2.18
VSX2P58304 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
VSX2P58304 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
VSX2P58304 RNU6-377P-201ENST00000515965 102 ntBASIC1.46□□□□□ -2.18
VSX2P58304 RNA5SP503-201ENST00000517047 117 ntBASIC1.46□□□□□ -2.18
VSX2P58304 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.46□□□□□ -2.18
VSX2P58304 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VSX2P58304 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.46□□□□□ -2.18
VSX2P58304 MIR4703-201ENST00000577728 79 ntBASIC1.46□□□□□ -2.18
VSX2P58304 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.46□□□□□ -2.18
VSX2P58304 AC025449.1-201ENST00000603896 529 ntBASIC1.46□□□□□ -2.18
VSX2P58304 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
VSX2P58304 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VSX2P58304 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VSX2P58304 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
VSX2P58304 RNU5A-2P-201ENST00000384337 116 ntBASIC1.45□□□□□ -2.18
VSX2P58304 RNU6-1127P-201ENST00000384580 107 ntBASIC1.45□□□□□ -2.18
VSX2P58304 RNA5SP212-201ENST00000391223 107 ntBASIC1.45□□□□□ -2.18
VSX2P58304 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
VSX2P58304 RNU2-9P-201ENST00000410194 145 ntBASIC1.45□□□□□ -2.18
VSX2P58304 SRIP3-201ENST00000413200 219 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.45□□□□□ -2.18
VSX2P58304 AL358934.1-201ENST00000432346 324 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.45□□□□□ -2.18
VSX2P58304 RPS27AP8-201ENST00000452665 445 ntBASIC1.45□□□□□ -2.18
VSX2P58304 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.45□□□□□ -2.18
VSX2P58304 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.45□□□□□ -2.18
VSX2P58304 MTND2P33-201ENST00000506452 1031 ntBASIC1.45□□□□□ -2.18
VSX2P58304 RNU2-69P-201ENST00000516061 100 ntBASIC1.45□□□□□ -2.18
VSX2P58304 RNU6-970P-201ENST00000516312 107 ntBASIC1.45□□□□□ -2.18
VSX2P58304 RNVU1-2-201ENST00000516326 135 ntBASIC1.45□□□□□ -2.18
VSX2P58304 SNORA25.17-201ENST00000517184 124 ntBASIC1.45□□□□□ -2.18
VSX2P58304 COPS8P3-201ENST00000526024 482 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AP005435.4-201ENST00000529514 284 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AC023050.3-201ENST00000541142 333 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.45□□□□□ -2.18
VSX2P58304 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.45□□□□□ -2.18
VSX2P58304 AGGF1P4-201ENST00000568249 801 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AC103987.3-201ENST00000582071 292 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.45□□□□□ -2.18
VSX2P58304 Z94722.1-201ENST00000604328 474 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AC008945.2-201ENST00000606056 604 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AC002044.1-201ENST00000606707 158 ntBASIC1.45□□□□□ -2.18
VSX2P58304 AC006566.1-201ENST00000608943 513 ntBASIC1.45□□□□□ -2.18
VSX2P58304 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.44□□□□□ -2.18
VSX2P58304 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VSX2P58304 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VSX2P58304 RNU1-58P-201ENST00000362413 163 ntBASIC1.44□□□□□ -2.18
VSX2P58304 Y_RNA.201-201ENST00000364052 96 ntBASIC1.44□□□□□ -2.18
VSX2P58304 RNU4-48P-201ENST00000365559 182 ntBASIC1.44□□□□□ -2.18
VSX2P58304 RNU6-43P-201ENST00000384302 107 ntBASIC1.44□□□□□ -2.18
VSX2P58304 RNU6-393P-201ENST00000384475 107 ntBASIC1.44□□□□□ -2.18
VSX2P58304 MIR29C-201ENST00000385231 88 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.44□□□□□ -2.18
VSX2P58304 PIGFP2-201ENST00000421400 651 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC010975.2-201ENST00000427781 588 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.44□□□□□ -2.18
VSX2P58304 MTND2P29-201ENST00000438595 412 ntBASIC1.44□□□□□ -2.18
VSX2P58304 PRPS1P1-201ENST00000445305 876 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AL360221.1-201ENST00000445989 335 ntBASIC1.44□□□□□ -2.18
VSX2P58304 SCARNA18-201ENST00000459004 134 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.44□□□□□ -2.18
VSX2P58304 AC008834.1-201ENST00000511612 175 ntBASIC1.44□□□□□ -2.18
VSX2P58304 MTND3P5-201ENST00000512798 333 ntBASIC1.44□□□□□ -2.18
VSX2P58304 SNORA31.16-201ENST00000516773 139 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.44□□□□□ -2.18
VSX2P58304 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
VSX2P58304 SUB1P3-201ENST00000564581 315 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC022254.1-201ENST00000567857 235 ntBASIC1.44□□□□□ -2.18
VSX2P58304 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.44□□□□□ -2.18
VSX2P58304 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.44□□□□□ -2.18
VSX2P58304 AC008752.3-201ENST00000588113 712 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC245014.2-201ENST00000603689 287 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC246785.4-201ENST00000605374 287 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AC103810.8-201ENST00000607347 118 ntBASIC1.44□□□□□ -2.18
VSX2P58304 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
VSX2P58304 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms