Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC078809.1-201ENST00000427601 140 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN12P56749 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.85□□□□□ -2.27
CLDN12P56749 AC132479.1-201ENST00000449160 144 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN12P56749 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN12P56749 AC016925.1-201ENST00000458303 298 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AL049829.1-201ENST00000465411 156 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC112204.1-201ENST00000502591 103 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC117522.1-201ENST00000509821 380 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN12P56749 CENPUP1-201ENST00000526649 1202 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AP002453.2-201ENST00000533503 320 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC087883.1-201ENST00000551882 391 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN12P56749 BNIP3P16-201ENST00000589779 534 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 VN1R107P-201ENST00000601784 209 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AL590229.1-201ENST00000603497 542 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC083806.3-201ENST00000614016 455 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.85□□□□□ -2.27
CLDN12P56749 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CLDN12P56749 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CLDN12P56749 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.84□□□□□ -2.27
CLDN12P56749 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CLDN12P56749 AL391987.6-201ENST00000305671 199 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 Y_RNA.97-201ENST00000363094 102 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 SNORA25-201ENST00000384384 134 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CLDN12P56749 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
CLDN12P56749 RNA5SP201-201ENST00000410316 124 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.84□□□□□ -2.27
CLDN12P56749 AC013410.2-201ENST00000422627 201 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 RPS27AP14-201ENST00000422868 454 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 CALM2P2-201ENST00000428512 440 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 RPS6P15-201ENST00000431996 751 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 AL031313.1-201ENST00000448435 256 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 HMGN2P9-201ENST00000476875 229 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 RNU6-237P-201ENST00000515985 71 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 AP001893.2-201ENST00000526949 202 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.84□□□□□ -2.27
CLDN12P56749 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.84□□□□□ -2.27
CLDN12P56749 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 MIR4295-201ENST00000585286 85 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 BNIP3P40-201ENST00000596017 556 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 AC069431.2-201ENST00000604149 1099 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 AL022345.2-201ENST00000606307 135 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 AL157786.1-207ENST00000627771 695 ntBASIC0.84□□□□□ -2.27
CLDN12P56749 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CLDN12P56749 MTND4P14-201ENST00000435799 1354 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 RNU6-862P-201ENST00000362804 105 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 U3.9-201ENST00000363823 204 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 MIR558-201ENST00000384920 94 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 Y_RNA.595-201ENST00000410403 105 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 RNU2-39P-201ENST00000410604 198 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 RN7SKP61-201ENST00000410642 295 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AC114491.1-201ENST00000416095 246 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 MTCO2P21-201ENST00000419780 677 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AC244670.1-201ENST00000436879 112 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 RPS24P1-201ENST00000438550 371 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AC243964.1-201ENST00000441814 261 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.83□□□□□ -2.28
CLDN12P56749 SNRPFP4-201ENST00000456366 242 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 snoU13.30-201ENST00000458951 104 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 ATP5EP1-201ENST00000510257 156 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 RN7SKP88-201ENST00000516847 250 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AC109479.2-201ENST00000517842 174 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 MIR3664-201ENST00000579074 99 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 MIR3923-201ENST00000579521 83 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.83□□□□□ -2.28
CLDN12P56749 AC008521.1-201ENST00000587471 187 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AL359999.1-201ENST00000604513 294 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 BX284668.6-201ENST00000606899 438 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AC004492.1-201ENST00000607036 742 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 AL353149.1-201ENST00000610667 244 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 7SK.8-201ENST00000612110 250 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 7SK.11-201ENST00000615477 250 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 7SK.13-201ENST00000622040 250 ntBASIC0.83□□□□□ -2.28
CLDN12P56749 RNU1-96P-201ENST00000364163 162 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 SNORA24.1-201ENST00000384401 135 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 SNORA26.3-201ENST00000391119 136 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 RNU2-3P-201ENST00000410144 191 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.82□□□□□ -2.28
CLDN12P56749 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.82□□□□□ -2.28
CLDN12P56749 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.82□□□□□ -2.28
CLDN12P56749 AL163540.1-201ENST00000485382 386 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 AC116347.2-201ENST00000514912 523 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 RNU6-685P-201ENST00000517088 95 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 CYCSP23-201ENST00000519781 313 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.82□□□□□ -2.28
CLDN12P56749 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.82□□□□□ -2.28
CLDN12P56749 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
CLDN12P56749 AC109446.1-201ENST00000566172 220 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 AC136932.1-201ENST00000574771 208 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 HMGN1P30-201ENST00000589286 268 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 MIR3976-201ENST00000606807 139 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 AC104073.3-201ENST00000610942 955 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms