Protein–RNA interactions for Protein: P56182

RRP1, Ribosomal RNA processing protein 1 homolog A, humanhuman

Known RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1P56182 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RRP1P56182 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RRP1P56182 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RRP1P56182 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RRP1P56182 RNU6-1115P-201ENST00000362490 106 ntBASIC2.99□□□□□ -1.93
RRP1P56182 Y_RNA.144-201ENST00000363521 113 ntBASIC2.99□□□□□ -1.93
RRP1P56182 Y_RNA.399-201ENST00000383955 105 ntBASIC2.99□□□□□ -1.93
RRP1P56182 CISD1P1-201ENST00000393907 327 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.99□□□□□ -1.93
RRP1P56182 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.99□□□□□ -1.93
RRP1P56182 AL358176.2-201ENST00000425769 204 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.99□□□□□ -1.93
RRP1P56182 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.99□□□□□ -1.93
RRP1P56182 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.99□□□□□ -1.93
RRP1P56182 MIR2053-201ENST00000459295 91 ntBASIC2.99□□□□□ -1.93
RRP1P56182 RPL31P41-201ENST00000477967 372 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AC026801.1-201ENST00000497178 464 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.99□□□□□ -1.93
RRP1P56182 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.99□□□□□ -1.93
RRP1P56182 SMURF2P1-201ENST00000514992 481 ntBASIC2.99□□□□□ -1.93
RRP1P56182 RN7SKP40-201ENST00000517211 242 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AC025755.1-201ENST00000521306 278 ntBASIC2.99□□□□□ -1.93
RRP1P56182 RANP3-201ENST00000530970 276 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.99□□□□□ -1.93
RRP1P56182 MIR4524B-201ENST00000581569 115 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AL670379.4-201ENST00000605279 254 ntBASIC2.99□□□□□ -1.93
RRP1P56182 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.99□□□□□ -1.93
RRP1P56182 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RRP1P56182 Y_RNA.28-201ENST00000362554 111 ntBASIC2.98□□□□□ -1.93
RRP1P56182 VTRNA1-1-201ENST00000363120 99 ntBASIC2.98□□□□□ -1.93
RRP1P56182 Y_RNA.112-201ENST00000363250 102 ntBASIC2.98□□□□□ -1.93
RRP1P56182 RNA5SP68-201ENST00000363885 119 ntBASIC2.98□□□□□ -1.93
RRP1P56182 SNORD114-30-201ENST00000364448 72 ntBASIC2.98□□□□□ -1.93
RRP1P56182 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RRP1P56182 Y_RNA.422-201ENST00000384054 114 ntBASIC2.98□□□□□ -1.93
RRP1P56182 Y_RNA.482-201ENST00000384377 111 ntBASIC2.98□□□□□ -1.93
RRP1P56182 RNU6-601P-201ENST00000384540 107 ntBASIC2.98□□□□□ -1.93
RRP1P56182 RNU6-1105P-201ENST00000384774 107 ntBASIC2.98□□□□□ -1.93
RRP1P56182 MIR568-201ENST00000385036 95 ntBASIC2.98□□□□□ -1.93
RRP1P56182 MIR504-201ENST00000385065 83 ntBASIC2.98□□□□□ -1.93
RRP1P56182 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
RRP1P56182 RPL30P15-201ENST00000457129 321 ntBASIC2.98□□□□□ -1.93
RRP1P56182 snoU13.26-201ENST00000459452 105 ntBASIC2.98□□□□□ -1.93
RRP1P56182 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.98□□□□□ -1.93
RRP1P56182 AC113155.1-201ENST00000511141 769 ntBASIC2.98□□□□□ -1.93
RRP1P56182 RNA5SP148-201ENST00000516527 94 ntBASIC2.98□□□□□ -1.93
RRP1P56182 RPPH1-2P-201ENST00000516688 293 ntBASIC2.98□□□□□ -1.93
RRP1P56182 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.98□□□□□ -1.93
RRP1P56182 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.98□□□□□ -1.93
RRP1P56182 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.98□□□□□ -1.93
RRP1P56182 AP002770.2-201ENST00000543613 532 ntBASIC2.98□□□□□ -1.93
RRP1P56182 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.98□□□□□ -1.93
RRP1P56182 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.98□□□□□ -1.93
RRP1P56182 AC021739.1-201ENST00000559631 174 ntBASIC2.98□□□□□ -1.93
RRP1P56182 AC027176.1-201ENST00000560204 514 ntBASIC2.98□□□□□ -1.93
RRP1P56182 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.98□□□□□ -1.93
RRP1P56182 SNORD53-201ENST00000579969 78 ntBASIC2.98□□□□□ -1.93
RRP1P56182 AC046143.2-201ENST00000609789 160 ntBASIC2.98□□□□□ -1.93
RRP1P56182 MIR6817-201ENST00000615588 66 ntBASIC2.98□□□□□ -1.93
RRP1P56182 AC064859.1-201ENST00000624741 174 ntBASIC2.98□□□□□ -1.93
RRP1P56182 MIR3199-2-201ENST00000636243 86 ntBASIC2.98□□□□□ -1.93
RRP1P56182 U6.99-201ENST00000637524 83 ntBASIC2.98□□□□□ -1.93
RRP1P56182 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
RRP1P56182 KPNA2P1-201ENST00000458289 1591 ntBASIC2.98□□□□□ -1.93
RRP1P56182 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
RRP1P56182 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.98□□□□□ -1.93
RRP1P56182 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
RRP1P56182 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.98□□□□□ -1.93
RRP1P56182 MTND5P30-201ENST00000452896 1731 ntBASIC2.97□□□□□ -1.93
RRP1P56182 RNU6-1303P-201ENST00000364841 107 ntBASIC2.97□□□□□ -1.93
RRP1P56182 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RRP1P56182 Y_RNA.404-201ENST00000383978 102 ntBASIC2.97□□□□□ -1.93
RRP1P56182 Y_RNA.459-201ENST00000384251 102 ntBASIC2.97□□□□□ -1.93
RRP1P56182 RNU6-393P-201ENST00000384475 107 ntBASIC2.97□□□□□ -1.93
RRP1P56182 RNU6-750P-201ENST00000390946 107 ntBASIC2.97□□□□□ -1.93
RRP1P56182 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.97□□□□□ -1.93
RRP1P56182 Y_RNA.605-201ENST00000410577 105 ntBASIC2.97□□□□□ -1.93
RRP1P56182 RNU6-1025P-201ENST00000410629 104 ntBASIC2.97□□□□□ -1.93
RRP1P56182 AC098614.2-201ENST00000426040 255 ntBASIC2.97□□□□□ -1.93
RRP1P56182 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.97□□□□□ -1.93
RRP1P56182 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.97□□□□□ -1.93
RRP1P56182 HMGN2P10-201ENST00000448085 265 ntBASIC2.97□□□□□ -1.93
RRP1P56182 Y_RNA.653-201ENST00000459091 95 ntBASIC2.97□□□□□ -1.93
RRP1P56182 RNU7-167P-201ENST00000459160 62 ntBASIC2.97□□□□□ -1.93
RRP1P56182 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.97□□□□□ -1.93
RRP1P56182 AC234781.5-201ENST00000508429 271 ntBASIC2.97□□□□□ -1.93
RRP1P56182 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.97□□□□□ -1.93
RRP1P56182 SNORA14.1-201ENST00000516113 141 ntBASIC2.97□□□□□ -1.93
RRP1P56182 RNA5SP24-201ENST00000516478 95 ntBASIC2.97□□□□□ -1.93
RRP1P56182 RNU6-1183P-201ENST00000517054 60 ntBASIC2.97□□□□□ -1.93
RRP1P56182 AL157871.3-201ENST00000557231 293 ntBASIC2.97□□□□□ -1.93
RRP1P56182 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.97□□□□□ -1.93
RRP1P56182 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
RRP1P56182 MIR6766-201ENST00000622641 72 ntBASIC2.97□□□□□ -1.93
RRP1P56182 AL669831.3-213ENST00000636676 183 ntBASIC2.97□□□□□ -1.93
RRP1P56182 MTND5P16-201ENST00000460269 1703 ntBASIC2.96□□□□□ -1.93
RRP1P56182 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RRP1P56182 Y_RNA.33-201ENST00000362591 102 ntBASIC2.96□□□□□ -1.94
RRP1P56182 RNU6-639P-201ENST00000384074 107 ntBASIC2.96□□□□□ -1.94
RRP1P56182 SNORA67.4-201ENST00000384688 142 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms