Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC026271.5-201ENST00000577873 130 ntBASIC1.81□□□□□ -2.12
LIM2P55344 AC103987.3-201ENST00000582071 292 ntBASIC1.81□□□□□ -2.12
LIM2P55344 VN1R80P-201ENST00000597126 338 ntBASIC1.81□□□□□ -2.12
LIM2P55344 SNRPGP17-201ENST00000603780 214 ntBASIC1.81□□□□□ -2.12
LIM2P55344 ELOCP5-201ENST00000604924 333 ntBASIC1.81□□□□□ -2.12
LIM2P55344 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LIM2P55344 MIR6895-201ENST00000613497 78 ntBASIC1.81□□□□□ -2.12
LIM2P55344 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
LIM2P55344 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
LIM2P55344 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.81□□□□□ -2.12
LIM2P55344 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
LIM2P55344 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
LIM2P55344 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LIM2P55344 AC092268.1-201ENST00000342691 405 ntBASIC1.8□□□□□ -2.12
LIM2P55344 RNU1-23P-201ENST00000363361 144 ntBASIC1.8□□□□□ -2.12
LIM2P55344 RNU4-40P-201ENST00000364351 143 ntBASIC1.8□□□□□ -2.12
LIM2P55344 RNU6-142P-201ENST00000384019 107 ntBASIC1.8□□□□□ -2.12
LIM2P55344 RNA5SP219-201ENST00000390940 113 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AL591034.2-201ENST00000402839 359 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.8□□□□□ -2.12
LIM2P55344 MTCO3P41-201ENST00000414801 328 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.8□□□□□ -2.12
LIM2P55344 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.8□□□□□ -2.12
LIM2P55344 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
LIM2P55344 AL590556.1-201ENST00000423231 483 ntBASIC1.8□□□□□ -2.12
LIM2P55344 HMGN2P38-201ENST00000423806 265 ntBASIC1.8□□□□□ -2.12
LIM2P55344 RPS15AP10-201ENST00000432472 382 ntBASIC1.8□□□□□ -2.12
LIM2P55344 SEPT14P3-201ENST00000439401 183 ntBASIC1.8□□□□□ -2.12
LIM2P55344 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.8□□□□□ -2.12
LIM2P55344 AL732372.2-207ENST00000445840 183 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AL513124.1-201ENST00000450410 614 ntBASIC1.8□□□□□ -2.12
LIM2P55344 SEPT14P2-201ENST00000453405 183 ntBASIC1.8□□□□□ -2.12
LIM2P55344 TPTE2P5-203ENST00000458118 728 ntBASIC1.8□□□□□ -2.12
LIM2P55344 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.8□□□□□ -2.12
LIM2P55344 UBL5P3-201ENST00000475112 231 ntBASIC1.8□□□□□ -2.12
LIM2P55344 SEPT14P4-201ENST00000513445 186 ntBASIC1.8□□□□□ -2.12
LIM2P55344 RNU6-1069P-201ENST00000516612 133 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.8□□□□□ -2.12
LIM2P55344 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.8□□□□□ -2.12
LIM2P55344 AC087854.1-201ENST00000519706 414 ntBASIC1.8□□□□□ -2.12
LIM2P55344 FO082796.1-201ENST00000523795 183 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AC022616.8-201ENST00000533569 253 ntBASIC1.8□□□□□ -2.12
LIM2P55344 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.8□□□□□ -2.12
LIM2P55344 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.8□□□□□ -2.12
LIM2P55344 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.8□□□□□ -2.12
LIM2P55344 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
LIM2P55344 AC068137.3-201ENST00000639191 341 ntBASIC1.8□□□□□ -2.12
LIM2P55344 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
LIM2P55344 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.8□□□□□ -2.12
LIM2P55344 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
LIM2P55344 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LIM2P55344 SNORD32A-201ENST00000364805 84 ntBASIC1.79□□□□□ -2.12
LIM2P55344 RNU6-546P-201ENST00000383991 107 ntBASIC1.79□□□□□ -2.12
LIM2P55344 CALM2P3-201ENST00000400429 449 ntBASIC1.79□□□□□ -2.12
LIM2P55344 RNA5SP489-201ENST00000410986 109 ntBASIC1.79□□□□□ -2.12
LIM2P55344 MORF4L1P6-201ENST00000418771 268 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AL133396.1-201ENST00000432048 687 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AL121601.2-201ENST00000438019 707 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.79□□□□□ -2.12
LIM2P55344 AL031274.1-201ENST00000450334 232 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AL353752.1-201ENST00000454946 260 ntBASIC1.79□□□□□ -2.12
LIM2P55344 RNU6-1208P-201ENST00000459588 107 ntBASIC1.79□□□□□ -2.12
LIM2P55344 RPL21P99-201ENST00000480369 423 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.79□□□□□ -2.12
LIM2P55344 HMGB1P35-201ENST00000503360 598 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AK3P2-201ENST00000507976 429 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC009646.1-201ENST00000510455 318 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.79□□□□□ -2.12
LIM2P55344 RNU5F-2P-201ENST00000516066 82 ntBASIC1.79□□□□□ -2.12
LIM2P55344 SNORA31.25-201ENST00000517242 134 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.79□□□□□ -2.12
LIM2P55344 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.79□□□□□ -2.12
LIM2P55344 AL157687.1-201ENST00000554853 619 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AL512360.1-201ENST00000555346 234 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AL162413.1-201ENST00000603198 110 ntBASIC1.79□□□□□ -2.12
LIM2P55344 RNU6-85P-201ENST00000605989 107 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC009318.2-201ENST00000610917 651 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC090517.3-201ENST00000625170 141 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.79□□□□□ -2.12
LIM2P55344 AC241585.2-209ENST00000638217 143 ntBASIC1.79□□□□□ -2.12
LIM2P55344 AC099654.12-201ENST00000639868 649 ntBASIC1.79□□□□□ -2.12
LIM2P55344 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LIM2P55344 RNU6-428P-201ENST00000362942 107 ntBASIC1.78□□□□□ -2.12
LIM2P55344 RNU4-56P-201ENST00000364700 142 ntBASIC1.78□□□□□ -2.12
LIM2P55344 RNU6-827P-201ENST00000365553 106 ntBASIC1.78□□□□□ -2.12
LIM2P55344 RNU6-1032P-201ENST00000384100 107 ntBASIC1.78□□□□□ -2.12
LIM2P55344 RNU6-43P-201ENST00000384302 107 ntBASIC1.78□□□□□ -2.12
LIM2P55344 MIR181A1-201ENST00000385026 110 ntBASIC1.78□□□□□ -2.12
LIM2P55344 MIR29C-201ENST00000385231 88 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AL355497.1-201ENST00000406262 551 ntBASIC1.78□□□□□ -2.12
LIM2P55344 RNU2-48P-201ENST00000410694 191 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AP000275.1-201ENST00000411943 390 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AC244670.1-201ENST00000436879 112 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AC245102.2-201ENST00000448956 180 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AC132942.1-201ENST00000486753 483 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.78□□□□□ -2.12
LIM2P55344 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.78□□□□□ -2.12
LIM2P55344 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.78□□□□□ -2.12
LIM2P55344 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms