Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.48□□□□□ -2.17
CDH6P55285 AC243964.1-201ENST00000441814 261 ntBASIC1.48□□□□□ -2.17
CDH6P55285 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
CDH6P55285 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.48□□□□□ -2.17
CDH6P55285 AL360221.1-201ENST00000445989 335 ntBASIC1.48□□□□□ -2.17
CDH6P55285 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH6P55285 AL033528.1-201ENST00000453780 140 ntBASIC1.48□□□□□ -2.17
CDH6P55285 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH6P55285 AC145146.1-201ENST00000496370 254 ntBASIC1.48□□□□□ -2.17
CDH6P55285 AC109479.2-201ENST00000517842 174 ntBASIC1.48□□□□□ -2.17
CDH6P55285 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.48□□□□□ -2.17
CDH6P55285 MIR4524B-201ENST00000581569 115 ntBASIC1.48□□□□□ -2.17
CDH6P55285 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH6P55285 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.48□□□□□ -2.17
CDH6P55285 Z84480.1-201ENST00000605131 311 ntBASIC1.48□□□□□ -2.17
CDH6P55285 AP001506.1-201ENST00000615444 211 ntBASIC1.48□□□□□ -2.17
CDH6P55285 SNORD98-201ENST00000636377 67 ntBASIC1.48□□□□□ -2.17
CDH6P55285 AP000560.1-201ENST00000624150 1937 ntBASIC1.48□□□□□ -2.17
CDH6P55285 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDH6P55285 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
CDH6P55285 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.47□□□□□ -2.17
CDH6P55285 LINC02555-201ENST00000563933 1951 ntBASIC1.47□□□□□ -2.17
CDH6P55285 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH6P55285 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
CDH6P55285 RNU6-457P-201ENST00000363999 107 ntBASIC1.47□□□□□ -2.17
CDH6P55285 Y_RNA.332-201ENST00000365271 113 ntBASIC1.47□□□□□ -2.17
CDH6P55285 RNU6-142P-201ENST00000384019 107 ntBASIC1.47□□□□□ -2.17
CDH6P55285 RNU6-74P-201ENST00000384235 107 ntBASIC1.47□□□□□ -2.17
CDH6P55285 MIR454-201ENST00000390180 115 ntBASIC1.47□□□□□ -2.17
CDH6P55285 RNA5SP213-201ENST00000391031 106 ntBASIC1.47□□□□□ -2.17
CDH6P55285 SNORA12-201ENST00000391162 147 ntBASIC1.47□□□□□ -2.17
CDH6P55285 MTND3P17-201ENST00000416968 344 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AL669831.1-202ENST00000428504 417 ntBASIC1.47□□□□□ -2.17
CDH6P55285 GTF2IP13-201ENST00000438487 386 ntBASIC1.47□□□□□ -2.17
CDH6P55285 HMGB1P18-201ENST00000438801 619 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AL133217.1-201ENST00000450980 425 ntBASIC1.47□□□□□ -2.17
CDH6P55285 RNU1-131P-201ENST00000458943 161 ntBASIC1.47□□□□□ -2.17
CDH6P55285 MTCYBP35-201ENST00000503630 1137 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AC005741.1-201ENST00000511094 432 ntBASIC1.47□□□□□ -2.17
CDH6P55285 MIR449C-201ENST00000516047 92 ntBASIC1.47□□□□□ -2.17
CDH6P55285 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
CDH6P55285 RNA5SP503-201ENST00000517047 117 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AC060788.1-201ENST00000521318 469 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AP003072.2-201ENST00000527756 676 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH6P55285 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.47□□□□□ -2.17
CDH6P55285 SUB1P4-201ENST00000566062 339 ntBASIC1.47□□□□□ -2.17
CDH6P55285 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AC008752.3-201ENST00000588113 712 ntBASIC1.47□□□□□ -2.17
CDH6P55285 BNIP3P16-201ENST00000589779 534 ntBASIC1.47□□□□□ -2.17
CDH6P55285 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH6P55285 MIR8074-201ENST00000615081 81 ntBASIC1.47□□□□□ -2.17
CDH6P55285 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.47□□□□□ -2.17
CDH6P55285 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
CDH6P55285 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDH6P55285 RNU4-21P-201ENST00000362802 126 ntBASIC1.46□□□□□ -2.18
CDH6P55285 SNORD114-6-201ENST00000364393 72 ntBASIC1.46□□□□□ -2.18
CDH6P55285 RNU6-26P-201ENST00000383985 107 ntBASIC1.46□□□□□ -2.18
CDH6P55285 RNU6-1029P-201ENST00000384109 107 ntBASIC1.46□□□□□ -2.18
CDH6P55285 MT-TH-201ENST00000387441 69 ntBASIC1.46□□□□□ -2.18
CDH6P55285 RNU6-293P-201ENST00000411259 106 ntBASIC1.46□□□□□ -2.18
CDH6P55285 AL357134.1-201ENST00000445848 426 ntBASIC1.46□□□□□ -2.18
CDH6P55285 FTH1P25-201ENST00000447665 469 ntBASIC1.46□□□□□ -2.18
CDH6P55285 HMGN2P18-201ENST00000450680 270 ntBASIC1.46□□□□□ -2.18
CDH6P55285 ART2BP-201ENST00000453501 499 ntBASIC1.46□□□□□ -2.18
CDH6P55285 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH6P55285 RNU7-182P-201ENST00000459009 62 ntBASIC1.46□□□□□ -2.18
CDH6P55285 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.46□□□□□ -2.18
CDH6P55285 SNORA18.6-201ENST00000516792 115 ntBASIC1.46□□□□□ -2.18
CDH6P55285 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CDH6P55285 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH6P55285 AC023050.3-201ENST00000541142 333 ntBASIC1.46□□□□□ -2.18
CDH6P55285 MTATP6P24-201ENST00000576835 677 ntBASIC1.46□□□□□ -2.18
CDH6P55285 MIR4775-201ENST00000581168 75 ntBASIC1.46□□□□□ -2.18
CDH6P55285 AL590229.1-201ENST00000603497 542 ntBASIC1.46□□□□□ -2.18
CDH6P55285 RNU6-1141P-201ENST00000364520 107 ntBASIC1.45□□□□□ -2.18
CDH6P55285 RNU6-108P-201ENST00000365558 107 ntBASIC1.45□□□□□ -2.18
CDH6P55285 U8.10-201ENST00000384260 133 ntBASIC1.45□□□□□ -2.18
CDH6P55285 RNU6-692P-201ENST00000384496 107 ntBASIC1.45□□□□□ -2.18
CDH6P55285 RNU6-297P-201ENST00000384636 107 ntBASIC1.45□□□□□ -2.18
CDH6P55285 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CDH6P55285 SNORA17.3-201ENST00000391159 129 ntBASIC1.45□□□□□ -2.18
CDH6P55285 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AL365203.2-201ENST00000423444 196 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH6P55285 VN1R108P-201ENST00000431580 830 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AL596276.1-201ENST00000434465 418 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH6P55285 SNRPGP9-201ENST00000456025 225 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AC010409.1-201ENST00000487382 476 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH6P55285 AC025465.3-201ENST00000510570 311 ntBASIC1.45□□□□□ -2.18
CDH6P55285 SNORD27.1-201ENST00000516319 72 ntBASIC1.45□□□□□ -2.18
CDH6P55285 SNORA31.17-201ENST00000516953 127 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH6P55285 AC107304.1-201ENST00000604229 296 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AC064872.1-201ENST00000604823 1072 ntBASIC1.45□□□□□ -2.18
CDH6P55285 Z99289.3-201ENST00000605586 594 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AC087683.2-201ENST00000611384 326 ntBASIC1.45□□□□□ -2.18
CDH6P55285 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms