Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCNKAP51800 AC010329.5-201ENST00000623497 2174 ntBASIC2.6□□□□□ -1.99
CLCNKAP51800 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLCNKAP51800 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.59□□□□□ -1.99
CLCNKAP51800 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLCNKAP51800 KPNA2P1-201ENST00000458289 1591 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCNKAP51800 RNU6-843P-201ENST00000384454 104 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 MIR521-1-201ENST00000384902 87 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCNKAP51800 Y_RNA.594-201ENST00000410373 140 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.59□□□□□ -1.99
CLCNKAP51800 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CLCNKAP51800 AL133396.1-201ENST00000432048 687 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 AC243964.1-201ENST00000441814 261 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCNKAP51800 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 U8.21-201ENST00000459536 136 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 AP001025.1-201ENST00000486139 332 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 Y_RNA.670-201ENST00000516255 105 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCNKAP51800 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCNKAP51800 MIR4513-201ENST00000581077 86 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 AC018462.2-201ENST00000605375 395 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 AC009229.3-201ENST00000608056 282 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCNKAP51800 MIR3529-201ENST00000637713 78 ntBASIC2.59□□□□□ -1.99
CLCNKAP51800 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.59□□□□□ -1.99
CLCNKAP51800 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CLCNKAP51800 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.59□□□□□ -2
CLCNKAP51800 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CLCNKAP51800 MAPK10-266ENST00000641066 6555 ntBASIC2.58□□□□□ -2
CLCNKAP51800 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
CLCNKAP51800 RNU6-593P-201ENST00000364716 112 ntBASIC2.58□□□□□ -2
CLCNKAP51800 Y_RNA.419-201ENST00000384041 102 ntBASIC2.58□□□□□ -2
CLCNKAP51800 RNU6-748P-201ENST00000384648 107 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AC007969.2-201ENST00000441891 191 ntBASIC2.58□□□□□ -2
CLCNKAP51800 OSTCP8-201ENST00000445117 448 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AC012308.1-201ENST00000451232 178 ntBASIC2.58□□□□□ -2
CLCNKAP51800 SNORD19B-201ENST00000459623 84 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AP001324.2-201ENST00000461163 319 ntBASIC2.58□□□□□ -2
CLCNKAP51800 RPS29P27-201ENST00000463711 170 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AC133134.1-201ENST00000466800 359 ntBASIC2.58□□□□□ -2
CLCNKAP51800 RPL7P42-201ENST00000481005 679 ntBASIC2.58□□□□□ -2
CLCNKAP51800 SNORA31.6-201ENST00000516241 130 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.58□□□□□ -2
CLCNKAP51800 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.58□□□□□ -2
CLCNKAP51800 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.58□□□□□ -2
CLCNKAP51800 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.58□□□□□ -2
CLCNKAP51800 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.58□□□□□ -2
CLCNKAP51800 BNIP3P16-201ENST00000589779 534 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AL356280.1-201ENST00000603614 379 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AL050343.2-201ENST00000607338 280 ntBASIC2.58□□□□□ -2
CLCNKAP51800 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.58□□□□□ -2
CLCNKAP51800 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.58□□□□□ -2
CLCNKAP51800 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.58□□□□□ -2
CLCNKAP51800 AL669831.3-213ENST00000636676 183 ntBASIC2.58□□□□□ -2
CLCNKAP51800 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
CLCNKAP51800 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLCNKAP51800 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
CLCNKAP51800 RNU6-1188P-201ENST00000363795 107 ntBASIC2.57□□□□□ -2
CLCNKAP51800 Y_RNA.259-201ENST00000364619 101 ntBASIC2.57□□□□□ -2
CLCNKAP51800 Y_RNA.404-201ENST00000383978 102 ntBASIC2.57□□□□□ -2
CLCNKAP51800 RNU6-842P-201ENST00000384269 107 ntBASIC2.57□□□□□ -2
CLCNKAP51800 RNY4P36-201ENST00000391116 96 ntBASIC2.57□□□□□ -2
CLCNKAP51800 RNU6-1050P-201ENST00000410388 107 ntBASIC2.57□□□□□ -2
CLCNKAP51800 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.57□□□□□ -2
CLCNKAP51800 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.57□□□□□ -2
CLCNKAP51800 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.57□□□□□ -2
CLCNKAP51800 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.57□□□□□ -2
CLCNKAP51800 RPS3P1-201ENST00000456781 192 ntBASIC2.57□□□□□ -2
CLCNKAP51800 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.57□□□□□ -2
CLCNKAP51800 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.57□□□□□ -2
CLCNKAP51800 SCARNA17.1-201ENST00000516211 143 ntBASIC2.57□□□□□ -2
CLCNKAP51800 SCARNA17.2-201ENST00000516334 143 ntBASIC2.57□□□□□ -2
CLCNKAP51800 Y_RNA.708-201ENST00000516950 96 ntBASIC2.57□□□□□ -2
CLCNKAP51800 Y_RNA.718-201ENST00000517110 102 ntBASIC2.57□□□□□ -2
CLCNKAP51800 AP005902.1-201ENST00000521358 186 ntBASIC2.57□□□□□ -2
CLCNKAP51800 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.57□□□□□ -2
CLCNKAP51800 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.57□□□□□ -2
CLCNKAP51800 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.57□□□□□ -2
CLCNKAP51800 AC109446.1-201ENST00000566172 220 ntBASIC2.57□□□□□ -2
CLCNKAP51800 AC011494.1-201ENST00000596454 237 ntBASIC2.57□□□□□ -2
CLCNKAP51800 AP000654.2-201ENST00000605633 586 ntBASIC2.57□□□□□ -2
CLCNKAP51800 SCARNA17.4-201ENST00000614296 143 ntBASIC2.57□□□□□ -2
CLCNKAP51800 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLCNKAP51800 AL136360.1-201ENST00000503377 1900 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.56□□□□□ -2
CLCNKAP51800 SNORA38-201ENST00000363946 132 ntBASIC2.56□□□□□ -2
CLCNKAP51800 RNU6-694P-201ENST00000364071 147 ntBASIC2.56□□□□□ -2
CLCNKAP51800 RNU6-622P-201ENST00000384272 103 ntBASIC2.56□□□□□ -2
CLCNKAP51800 MIR544A-201ENST00000384855 91 ntBASIC2.56□□□□□ -2
CLCNKAP51800 SNORA75.4-201ENST00000391278 119 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AC011816.1-201ENST00000441346 546 ntBASIC2.56□□□□□ -2
CLCNKAP51800 DAP3P1-201ENST00000441522 278 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AC104389.3-201ENST00000445629 235 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AL031659.1-201ENST00000447075 539 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.56□□□□□ -2
CLCNKAP51800 MTCO3P10-201ENST00000455912 772 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms