Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CXCL12P48061 AL512604.1-201ENST00000404812 257 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 RNA5SP390-201ENST00000410191 113 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 RNU2-23P-201ENST00000410545 195 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 SNORD56-201ENST00000413522 71 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 EDDM3CP-201ENST00000415977 425 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 MTCO2P34-201ENST00000421994 607 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL12P48061 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.5□□□□□ -2.17
CXCL12P48061 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL12P48061 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL12P48061 MTND1P18-201ENST00000448191 573 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 AC006026.2-201ENST00000457376 180 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 RNU6-956P-201ENST00000458868 103 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 RN7SL274P-201ENST00000492268 272 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.5□□□□□ -2.17
CXCL12P48061 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL12P48061 AC010486.3-201ENST00000511602 785 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 SNORA48.11-201ENST00000517015 89 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 RNU6-586P-201ENST00000517265 104 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL12P48061 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL12P48061 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.5□□□□□ -2.17
CXCL12P48061 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.5□□□□□ -2.17
CXCL12P48061 IMMP1LP2-201ENST00000552954 492 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL12P48061 MIR3126-201ENST00000577443 74 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 AC008121.3-201ENST00000618726 433 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 AC090517.3-201ENST00000625170 141 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 ELL2P3-201ENST00000457883 1602 ntBASIC1.5□□□□□ -2.17
CXCL12P48061 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-37P-201ENST00000362692 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-655P-201ENST00000362858 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-11P-201ENST00000364234 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 SNORD48-201ENST00000364953 64 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 Y_RNA.324-201ENST00000365165 102 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-234P-201ENST00000365229 104 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-25P-201ENST00000383873 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-48P-201ENST00000384161 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-16P-201ENST00000384385 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-15P-201ENST00000384534 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 RNU6-29P-201ENST00000384637 107 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 MIR561-201ENST00000385216 97 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CXCL12P48061 RNU4-46P-201ENST00000410818 138 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 OR9R1P-201ENST00000412200 877 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.49□□□□□ -2.17
CXCL12P48061 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.49□□□□□ -2.17
CXCL12P48061 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.49□□□□□ -2.17
CXCL12P48061 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.49□□□□□ -2.17
CXCL12P48061 AC022364.2-201ENST00000457963 554 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 SNORA31.25-201ENST00000517242 134 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 MTCO2P4-201ENST00000517968 247 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.49□□□□□ -2.17
CXCL12P48061 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.49□□□□□ -2.17
CXCL12P48061 AL391840.1-201ENST00000571144 367 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.49□□□□□ -2.17
CXCL12P48061 AC136443.5-201ENST00000603741 370 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 AC109347.2-201ENST00000610220 349 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 MIR6078-201ENST00000611069 100 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 Z69720.2-201ENST00000624755 279 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 AP003400.5-201ENST00000624827 617 ntBASIC1.49□□□□□ -2.17
CXCL12P48061 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
CXCL12P48061 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CXCL12P48061 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
CXCL12P48061 Y_RNA.159-201ENST00000363674 87 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 SNORD114-22-201ENST00000365423 72 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 RNU6-1274P-201ENST00000384557 107 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 RNU6-606P-201ENST00000384721 111 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 SNORD70.1-201ENST00000391007 85 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AL356432.1-201ENST00000405809 419 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL12P48061 BTF3L4P1-201ENST00000413813 468 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL12P48061 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL12P48061 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL12P48061 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.48□□□□□ -2.17
CXCL12P48061 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL12P48061 AC007969.2-201ENST00000441891 191 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 MTCO1P19-201ENST00000443487 500 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AL353752.1-201ENST00000454946 260 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL12P48061 MTCO3P7-201ENST00000510008 774 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC107953.1-201ENST00000522216 297 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL12P48061 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL12P48061 AC008752.3-201ENST00000588113 712 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC110760.3-201ENST00000598794 467 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC068790.2-201ENST00000602601 557 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC078795.2-201ENST00000602835 1252 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 ELOCP5-201ENST00000604924 333 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 RMST_2.1-201ENST00000617263 136 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 AC097520.1-201ENST00000624435 385 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 U4.7-201ENST00000638126 106 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 ZNF680P1-201ENST00000436625 1469 ntBASIC1.48□□□□□ -2.17
CXCL12P48061 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CXCL12P48061 RNU6-527P-201ENST00000363425 104 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms