Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AL591926.4-201ENST00000616895 298 ntBASIC-0.28□□□□□ -2.45
HTTP42858 RNU6-944P-201ENST00000364023 107 ntBASIC-0.29□□□□□ -2.46
HTTP42858 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.29□□□□□ -2.46
HTTP42858 AL590632.1-201ENST00000424289 371 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.29□□□□□ -2.46
HTTP42858 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.29□□□□□ -2.46
HTTP42858 AC130509.1-201ENST00000464158 433 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.29□□□□□ -2.46
HTTP42858 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.29□□□□□ -2.46
HTTP42858 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.29□□□□□ -2.46
HTTP42858 AL353765.1-201ENST00000605514 183 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AL133445.2-201ENST00000611191 527 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AC018926.3-201ENST00000618841 406 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AL157786.1-207ENST00000627771 695 ntBASIC-0.29□□□□□ -2.46
HTTP42858 RNU6-741P-201ENST00000383889 107 ntBASIC-0.29□□□□□ -2.46
HTTP42858 COX6CP10-201ENST00000416832 224 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.29□□□□□ -2.46
HTTP42858 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-0.29□□□□□ -2.46
HTTP42858 AC099677.2-201ENST00000436385 175 ntBASIC-0.29□□□□□ -2.46
HTTP42858 FABP5P4-201ENST00000437203 171 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.29□□□□□ -2.46
HTTP42858 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.29□□□□□ -2.46
HTTP42858 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.29□□□□□ -2.46
HTTP42858 AL049870.4-201ENST00000555741 486 ntBASIC-0.29□□□□□ -2.46
HTTP42858 ROCK1P1-201ENST00000573767 549 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AF038458.1-201ENST00000588406 262 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AP002906.1-201ENST00000603405 233 ntBASIC-0.29□□□□□ -2.46
HTTP42858 CASC19-280ENST00000642102 1351 ntBASIC-0.29□□□□□ -2.46
HTTP42858 RNA5SP275-201ENST00000363936 118 ntBASIC-0.29□□□□□ -2.46
HTTP42858 U8.5-201ENST00000364528 136 ntBASIC-0.29□□□□□ -2.46
HTTP42858 MTND4LP26-201ENST00000518144 282 ntBASIC-0.29□□□□□ -2.46
HTTP42858 AC105185.1-201ENST00000518705 535 ntBASIC-0.29□□□□□ -2.46
HTTP42858 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.29□□□□□ -2.46
HTTP42858 AC018926.1-201ENST00000616335 435 ntBASIC-0.29□□□□□ -2.46
HTTP42858 RNU6-486P-201ENST00000363116 107 ntBASIC-0.3□□□□□ -2.46
HTTP42858 MIR135A2-201ENST00000384854 100 ntBASIC-0.3□□□□□ -2.46
HTTP42858 RNU6-244P-201ENST00000391028 104 ntBASIC-0.3□□□□□ -2.46
HTTP42858 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.3□□□□□ -2.46
HTTP42858 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.3□□□□□ -2.46
HTTP42858 AC027338.1-201ENST00000514840 825 ntBASIC-0.3□□□□□ -2.46
HTTP42858 AC104057.1-201ENST00000515547 497 ntBASIC-0.3□□□□□ -2.46
HTTP42858 ACA59.2-201ENST00000517061 156 ntBASIC-0.3□□□□□ -2.46
HTTP42858 RNU6-667P-201ENST00000517186 102 ntBASIC-0.3□□□□□ -2.46
HTTP42858 RN7SKP256-201ENST00000517201 314 ntBASIC-0.3□□□□□ -2.46
HTTP42858 AC022616.2-201ENST00000523185 300 ntBASIC-0.3□□□□□ -2.46
HTTP42858 AC112187.2-201ENST00000604345 283 ntBASIC-0.3□□□□□ -2.46
HTTP42858 MIR3666-201ENST00000607845 111 ntBASIC-0.3□□□□□ -2.46
HTTP42858 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.3□□□□□ -2.46
HTTP42858 AC068647.2-201ENST00000637380 353 ntBASIC-0.3□□□□□ -2.46
HTTP42858 SNORA12.1-201ENST00000390873 148 ntBASIC-0.3□□□□□ -2.46
HTTP42858 RNFT1P2-201ENST00000443064 757 ntBASIC-0.3□□□□□ -2.46
HTTP42858 AC011005.2-201ENST00000487324 359 ntBASIC-0.3□□□□□ -2.46
HTTP42858 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.3□□□□□ -2.46
HTTP42858 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.3□□□□□ -2.46
HTTP42858 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.3□□□□□ -2.46
HTTP42858 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.3□□□□□ -2.46
HTTP42858 MIR8076-201ENST00000611401 83 ntBASIC-0.3□□□□□ -2.46
HTTP42858 U6.48-201ENST00000618523 106 ntBASIC-0.3□□□□□ -2.46
HTTP42858 FTX_2.1-201ENST00000618816 94 ntBASIC-0.3□□□□□ -2.46
HTTP42858 AL163051.2-201ENST00000618976 735 ntBASIC-0.3□□□□□ -2.46
HTTP42858 AC093648.1-201ENST00000623546 606 ntBASIC-0.3□□□□□ -2.46
HTTP42858 SNORD114-6-201ENST00000364393 72 ntBASIC-0.31□□□□□ -2.46
HTTP42858 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
HTTP42858 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.31□□□□□ -2.46
HTTP42858 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.31□□□□□ -2.46
HTTP42858 RNU6-917P-201ENST00000516294 104 ntBASIC-0.31□□□□□ -2.46
HTTP42858 RNU6-922P-201ENST00000516753 99 ntBASIC-0.31□□□□□ -2.46
HTTP42858 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.31□□□□□ -2.46
HTTP42858 MIR3165-201ENST00000579874 75 ntBASIC-0.31□□□□□ -2.46
HTTP42858 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
HTTP42858 AC009032.1-201ENST00000617574 431 ntBASIC-0.31□□□□□ -2.46
HTTP42858 U2.21-201ENST00000637295 81 ntBASIC-0.31□□□□□ -2.46
HTTP42858 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
HTTP42858 RNY4P7-201ENST00000364600 96 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AL049545.1-201ENST00000401856 572 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC127391.1-201ENST00000411737 98 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AP002371.1-201ENST00000463604 433 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.31□□□□□ -2.46
HTTP42858 HMGB1P28-201ENST00000507778 552 ntBASIC-0.31□□□□□ -2.46
HTTP42858 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.31□□□□□ -2.46
HTTP42858 MRPS36P4-201ENST00000534436 298 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC012213.3-201ENST00000577199 777 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.31□□□□□ -2.46
HTTP42858 SEPT14P17-201ENST00000617978 177 ntBASIC-0.31□□□□□ -2.46
HTTP42858 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.31□□□□□ -2.46
HTTP42858 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
HTTP42858 MIR412-201ENST00000362142 91 ntBASIC-0.31□□□□□ -2.46
HTTP42858 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.31□□□□□ -2.46
HTTP42858 SNORD32A-201ENST00000364805 84 ntBASIC-0.31□□□□□ -2.46
HTTP42858 SNORA75.6-201ENST00000391318 127 ntBASIC-0.31□□□□□ -2.46
HTTP42858 SNORD75.1-201ENST00000408373 60 ntBASIC-0.31□□□□□ -2.46
HTTP42858 RNU4-46P-201ENST00000410818 138 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC008267.5-201ENST00000424928 265 ntBASIC-0.31□□□□□ -2.46
HTTP42858 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC098831.1-201ENST00000440661 216 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AL592447.1-201ENST00000447592 540 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC233266.1-201ENST00000454518 96 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AL049714.1-201ENST00000466686 347 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms