Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SUB1P3-201ENST00000564581 315 ntBASIC1.35□□□□□ -2.19
RFC3P40938 BNIP3P16-201ENST00000589779 534 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AC234772.3-201ENST00000602277 528 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.35□□□□□ -2.19
RFC3P40938 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
RFC3P40938 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AC091304.6-201ENST00000619761 202 ntBASIC1.35□□□□□ -2.19
RFC3P40938 SNORD98-201ENST00000636377 67 ntBASIC1.35□□□□□ -2.19
RFC3P40938 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-37P-201ENST00000362692 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-11P-201ENST00000364234 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-1141P-201ENST00000364520 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-715P-201ENST00000365204 103 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-25P-201ENST00000383873 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-1-201ENST00000383898 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-26P-201ENST00000383985 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-48P-201ENST00000384161 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-36P-201ENST00000384172 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-4P-201ENST00000384205 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-5P-201ENST00000384238 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-3P-201ENST00000384314 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-16P-201ENST00000384385 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-15P-201ENST00000384534 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-2-201ENST00000384627 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-29P-201ENST00000384637 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-9-201ENST00000384776 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-33P-201ENST00000384793 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 SNORA12-201ENST00000391162 147 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AC004965.1-201ENST00000413033 213 ntBASIC1.34□□□□□ -2.19
RFC3P40938 MTCO3P46-201ENST00000425787 232 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AL669831.1-202ENST00000428504 417 ntBASIC1.34□□□□□ -2.19
RFC3P40938 GTF2IP13-201ENST00000438487 386 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.34□□□□□ -2.19
RFC3P40938 MTND2P4-201ENST00000445034 1004 ntBASIC1.34□□□□□ -2.19
RFC3P40938 ART2BP-201ENST00000453501 499 ntBASIC1.34□□□□□ -2.19
RFC3P40938 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.34□□□□□ -2.19
RFC3P40938 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RFC3P40938 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.34□□□□□ -2.19
RFC3P40938 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.34□□□□□ -2.19
RFC3P40938 AC023050.3-201ENST00000541142 333 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
RFC3P40938 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.34□□□□□ -2.19
RFC3P40938 MIR3908-201ENST00000579798 126 ntBASIC1.34□□□□□ -2.19
RFC3P40938 MIR4775-201ENST00000581168 75 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.34□□□□□ -2.19
RFC3P40938 MIR548AB-201ENST00000584917 84 ntBASIC1.34□□□□□ -2.19
RFC3P40938 RNU6-6P-201ENST00000606623 107 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AL050303.3-201ENST00000613704 284 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AC022513.1-201ENST00000624512 117 ntBASIC1.34□□□□□ -2.19
RFC3P40938 AL603839.4-201ENST00000624658 1005 ntBASIC1.34□□□□□ -2.19
RFC3P40938 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
RFC3P40938 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RFC3P40938 LINC02555-201ENST00000563933 1951 ntBASIC1.34□□□□□ -2.2
RFC3P40938 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RFC3P40938 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RFC3P40938 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
RFC3P40938 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
RFC3P40938 RNY4P34-201ENST00000364779 95 ntBASIC1.33□□□□□ -2.2
RFC3P40938 RNU6-439P-201ENST00000384188 106 ntBASIC1.33□□□□□ -2.2
RFC3P40938 RNU6-74P-201ENST00000384235 107 ntBASIC1.33□□□□□ -2.2
RFC3P40938 RNU6-43P-201ENST00000384302 107 ntBASIC1.33□□□□□ -2.2
RFC3P40938 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
RFC3P40938 RNU6-293P-201ENST00000411259 106 ntBASIC1.33□□□□□ -2.2
RFC3P40938 AC123900.1-201ENST00000420390 96 ntBASIC1.33□□□□□ -2.2
RFC3P40938 GPR143P-201ENST00000434155 205 ntBASIC1.33□□□□□ -2.2
RFC3P40938 MTND1P30-201ENST00000441241 901 ntBASIC1.33□□□□□ -2.2
RFC3P40938 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.33□□□□□ -2.2
RFC3P40938 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.33□□□□□ -2.2
RFC3P40938 AC130509.1-201ENST00000464158 433 ntBASIC1.33□□□□□ -2.2
RFC3P40938 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.33□□□□□ -2.2
RFC3P40938 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.33□□□□□ -2.2
RFC3P40938 AC005741.1-201ENST00000511094 432 ntBASIC1.33□□□□□ -2.2
RFC3P40938 SNORD27.1-201ENST00000516319 72 ntBASIC1.33□□□□□ -2.2
RFC3P40938 RNU6-1178P-201ENST00000516674 107 ntBASIC1.33□□□□□ -2.2
RFC3P40938 SNORA31.17-201ENST00000516953 127 ntBASIC1.33□□□□□ -2.2
RFC3P40938 AC106038.2-201ENST00000520706 568 ntBASIC1.33□□□□□ -2.2
RFC3P40938 AC009094.1-201ENST00000564443 426 ntBASIC1.33□□□□□ -2.2
RFC3P40938 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.33□□□□□ -2.2
RFC3P40938 VN1R107P-201ENST00000601784 209 ntBASIC1.33□□□□□ -2.2
RFC3P40938 AL136370.1-201ENST00000608166 691 ntBASIC1.33□□□□□ -2.2
RFC3P40938 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
RFC3P40938 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.33□□□□□ -2.2
RFC3P40938 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.33□□□□□ -2.2
RFC3P40938 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.33□□□□□ -2.2
RFC3P40938 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RFC3P40938 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
RFC3P40938 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RFC3P40938 U3.4-201ENST00000363352 213 ntBASIC1.32□□□□□ -2.2
RFC3P40938 RNU6-1097P-201ENST00000363586 107 ntBASIC1.32□□□□□ -2.2
RFC3P40938 RNU6-336P-201ENST00000364891 107 ntBASIC1.32□□□□□ -2.2
RFC3P40938 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RFC3P40938 MIR454-201ENST00000390180 115 ntBASIC1.32□□□□□ -2.2
RFC3P40938 MTCYBP2-201ENST00000407745 171 ntBASIC1.32□□□□□ -2.2
RFC3P40938 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC3P40938 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC3P40938 AC009961.2-201ENST00000435771 251 ntBASIC1.32□□□□□ -2.2
RFC3P40938 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
RFC3P40938 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC3P40938 AC013470.1-201ENST00000453438 462 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms