Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM23P36406 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM23P36406 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
TRIM23P36406 AP000560.1-201ENST00000624150 1937 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RNU6-38P-201ENST00000384085 107 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RNU6-1032P-201ENST00000384100 107 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 DLGAP5P1-201ENST00000430307 464 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM23P36406 HMGN2P3-201ENST00000433603 273 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 HMGN2P5-201ENST00000436882 273 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 SEPT14P3-201ENST00000439401 183 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM23P36406 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM23P36406 AL732372.2-207ENST00000445840 183 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 SEPT14P2-201ENST00000453405 183 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM23P36406 RNU6-333P-201ENST00000459117 107 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RNU7-138P-201ENST00000459479 64 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 AC055731.1-201ENST00000474387 401 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RPL30P1-201ENST00000488676 339 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 Y_RNA.654-201ENST00000497848 106 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RPL38P4-201ENST00000502376 214 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 SEPT14P4-201ENST00000513445 186 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RNA5SP401-201ENST00000515920 127 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RNU6-189P-201ENST00000516120 101 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RNU6-720P-201ENST00000516363 108 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 RNU2-44P-201ENST00000516795 194 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 FO082796.1-201ENST00000523795 183 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 ZNF519P2-201ENST00000557032 169 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 ANP32BP3-201ENST00000559213 706 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 AC093249.1-201ENST00000567049 203 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 AL162413.1-201ENST00000603198 110 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 AC123912.5-201ENST00000605470 343 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM23P36406 AC068137.3-201ENST00000639191 341 ntBASIC2.03□□□□□ -2.08
TRIM23P36406 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRIM23P36406 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
TRIM23P36406 AC121333.1-201ENST00000567488 2709 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 RNU4-75P-201ENST00000364621 146 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 Y_RNA.318-201ENST00000365131 97 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 SNORA25B-201ENST00000365507 128 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 Y_RNA.409-201ENST00000383990 98 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 MIR29B2-201ENST00000385055 81 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 MIR504-201ENST00000385065 83 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 MIR514A2-201ENST00000385131 88 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 MIR514A3-201ENST00000385132 88 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 SNORD37.1-201ENST00000390968 65 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 POLHP1-201ENST00000411806 470 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 AL139156.1-201ENST00000412785 841 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 USP9YP18-201ENST00000425912 695 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 RPL39P29-201ENST00000447779 157 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 PMCHL2-203ENST00000457791 237 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 TPTE2P5-203ENST00000458118 728 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 AC022447.4-201ENST00000504053 364 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 HMGB3P17-201ENST00000504195 649 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM23P36406 SNORA4.4-201ENST00000515921 135 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 MIR5583-1-201ENST00000580941 59 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 YWHAEP7-203ENST00000622054 312 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 AC090517.3-201ENST00000625170 141 ntBASIC2.02□□□□□ -2.09
TRIM23P36406 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.02□□□□□ -2.09
TRIM23P36406 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TRIM23P36406 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
TRIM23P36406 RNU6-212P-201ENST00000362642 104 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 RNU6-1285P-201ENST00000363480 105 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 RNU6-336P-201ENST00000364891 107 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 AL591034.2-201ENST00000402839 359 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.01□□□□□ -2.09
TRIM23P36406 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM23P36406 AL121601.2-201ENST00000438019 707 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 AC243964.1-201ENST00000441814 261 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 MTCO2P3-201ENST00000442543 421 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.01□□□□□ -2.09
TRIM23P36406 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM23P36406 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM23P36406 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM23P36406 AC018630.3-201ENST00000542637 96 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM23P36406 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 MIR4287-201ENST00000579398 78 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 VN1R80P-201ENST00000597126 338 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM23P36406 AC092954.2-201ENST00000609103 430 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 AC009318.2-201ENST00000610917 651 ntBASIC2.01□□□□□ -2.09
TRIM23P36406 Y_RNA.40-201ENST00000362645 93 ntBASIC2□□□□□ -2.09
TRIM23P36406 RNU6-1141P-201ENST00000364520 107 ntBASIC2□□□□□ -2.09
TRIM23P36406 RNU4-66P-201ENST00000365199 138 ntBASIC2□□□□□ -2.09
TRIM23P36406 Y_RNA.381-201ENST00000365666 102 ntBASIC2□□□□□ -2.09
TRIM23P36406 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM23P36406 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM23P36406 RNU6-1106P-201ENST00000390845 107 ntBASIC2□□□□□ -2.09
TRIM23P36406 RNA5SP219-201ENST00000390940 113 ntBASIC2□□□□□ -2.09
TRIM23P36406 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
TRIM23P36406 MIR1289-2-201ENST00000408360 111 ntBASIC2□□□□□ -2.09
TRIM23P36406 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2□□□□□ -2.09
TRIM23P36406 MTND1P34-201ENST00000438556 671 ntBASIC2□□□□□ -2.09
TRIM23P36406 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms