Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 Y_RNA.582-201ENST00000391023 95 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.71□□□□□ -2.14
SHMT2P34897 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.71□□□□□ -2.14
SHMT2P34897 AL591806.2-201ENST00000433122 173 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 AC002486.1-201ENST00000435098 391 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.71□□□□□ -2.14
SHMT2P34897 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.71□□□□□ -2.14
SHMT2P34897 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.71□□□□□ -2.14
SHMT2P34897 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.71□□□□□ -2.14
SHMT2P34897 snoU13.23-201ENST00000458863 104 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 RPS3AP17-201ENST00000472594 777 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 HMGB1P35-201ENST00000503360 598 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 AC010493.1-201ENST00000513479 292 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 RNU6-377P-201ENST00000515965 102 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 AC109479.2-201ENST00000517842 174 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 COPS8P3-201ENST00000526024 482 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 AC022616.8-201ENST00000533569 253 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.71□□□□□ -2.14
SHMT2P34897 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.71□□□□□ -2.14
SHMT2P34897 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 AC010928.2-201ENST00000588017 287 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 AL132822.1-201ENST00000617063 513 ntBASIC1.71□□□□□ -2.14
SHMT2P34897 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SHMT2P34897 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 Y_RNA.381-201ENST00000365666 102 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 RNU6-546P-201ENST00000383991 107 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 SNORD116-1-201ENST00000384335 95 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 RNU6-692P-201ENST00000384496 107 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 MIR676-201ENST00000390702 67 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 RNU6-1158P-201ENST00000391167 107 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 AL137159.1-201ENST00000452808 512 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 PMCHL2-203ENST00000457791 237 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 RNU7-167P-201ENST00000459160 62 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
SHMT2P34897 MTND2P33-201ENST00000506452 1031 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 CCDC34P1-201ENST00000507441 517 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.7□□□□□ -2.14
SHMT2P34897 RNU5F-2P-201ENST00000516066 82 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 AP001893.2-201ENST00000526949 202 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.7□□□□□ -2.14
SHMT2P34897 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 MIR3611-201ENST00000584484 83 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 BNIP3P16-201ENST00000589779 534 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 SNRPGP17-201ENST00000603780 214 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 AC091805.2-201ENST00000603848 235 ntBASIC1.7□□□□□ -2.14
SHMT2P34897 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.69□□□□□ -2.14
SHMT2P34897 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SHMT2P34897 Y_RNA.1-201ENST00000352915 104 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 Y_RNA.296-201ENST00000364930 108 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 MIR518A2-201ENST00000384966 87 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SHMT2P34897 RPS29P13-201ENST00000402041 169 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 RNU6-293P-201ENST00000411259 106 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.69□□□□□ -2.14
SHMT2P34897 AL645568.3-201ENST00000433683 316 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 AC087884.1-201ENST00000469738 328 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.69□□□□□ -2.14
SHMT2P34897 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
SHMT2P34897 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.69□□□□□ -2.14
SHMT2P34897 SNORA25.15-201ENST00000516487 89 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 RNU6-965P-201ENST00000516721 96 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 AC090115.3-201ENST00000553218 849 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 AC026271.5-201ENST00000577873 130 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 MIR4424-201ENST00000585257 86 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 AC004908.3-201ENST00000610248 625 ntBASIC1.69□□□□□ -2.14
SHMT2P34897 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.69□□□□□ -2.14
SHMT2P34897 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
SHMT2P34897 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.68□□□□□ -2.14
SHMT2P34897 RNU6-611P-201ENST00000384276 104 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 RNU6-43P-201ENST00000384302 107 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 MIR1262-201ENST00000408276 93 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 RNU4-55P-201ENST00000410731 137 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 RNU6-1245P-201ENST00000411130 106 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 RNA5SP450-201ENST00000411206 102 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.68□□□□□ -2.14
SHMT2P34897 SNAP23P1-201ENST00000433229 246 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 IFNA20P-201ENST00000436840 528 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
SHMT2P34897 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.68□□□□□ -2.14
SHMT2P34897 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.68□□□□□ -2.14
SHMT2P34897 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.68□□□□□ -2.14
SHMT2P34897 AL163973.1-201ENST00000484753 577 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AC079140.5-201ENST00000507882 310 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHMT2P34897 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.68□□□□□ -2.14
SHMT2P34897 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.68□□□□□ -2.14
SHMT2P34897 SNORA40.12-201ENST00000516329 111 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AC115990.1-201ENST00000526957 301 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AC004223.2-201ENST00000590309 544 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 VN1R107P-201ENST00000601784 209 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AC107304.1-201ENST00000604229 296 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AL034555.1-201ENST00000604816 211 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AC018889.1-201ENST00000605372 397 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 AC007684.1-201ENST00000609671 477 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms