Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNA5SP269-201ENST00000459032 137 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 SNRPGP7-201ENST00000469016 106 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 AC093259.1-201ENST00000509755 300 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 RNU6-377P-201ENST00000515965 102 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 RNA5SP503-201ENST00000517047 117 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 TRAV32-201ENST00000553993 340 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 AC091135.1-201ENST00000585943 307 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 Z94722.1-201ENST00000604328 474 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 SEPT14P19-203ENST00000633205 211 ntBASIC1.25□□□□□ -2.21
HLA-DMAP28067 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.25□□□□□ -2.21
HLA-DMAP28067 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HLA-DMAP28067 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HLA-DMAP28067 RNU6-1097P-201ENST00000363586 107 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 RNU6-336P-201ENST00000364891 107 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 RNU6-1127P-201ENST00000384580 107 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 RNU6-606P-201ENST00000384721 111 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 RNU4-26P-201ENST00000410270 107 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 NCOR1P3-201ENST00000420479 303 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AL121601.2-201ENST00000438019 707 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 SNRPFP4-201ENST00000456366 242 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AMD1P1-201ENST00000457220 922 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 SCARNA18-201ENST00000459004 134 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AC099513.1-201ENST00000490423 301 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 RNU2-69P-201ENST00000516061 100 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 SNORA25.17-201ENST00000517184 124 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HLA-DMAP28067 AK6P1-201ENST00000540219 478 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 AGGF1P4-201ENST00000568249 801 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 MIR4703-201ENST00000577728 79 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 MIR5583-1-201ENST00000580941 59 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AC025754.2-201ENST00000606491 432 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 AC002044.1-201ENST00000606707 158 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.24□□□□□ -2.21
HLA-DMAP28067 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
HLA-DMAP28067 RNU4-48P-201ENST00000365559 182 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 RNU6-43P-201ENST00000384302 107 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 RNU6-348P-201ENST00000384386 107 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 RNU6-393P-201ENST00000384475 107 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 MIR504-201ENST00000385065 83 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AL627390.1-201ENST00000396055 340 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 PIGFP2-201ENST00000421400 651 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 MTCO2P11-201ENST00000431069 680 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DMAP28067 MTCO1P44-201ENST00000441935 243 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 USP9YP29-201ENST00000445112 563 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 PRPS1P1-201ENST00000445305 876 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AL035666.1-201ENST00000446195 348 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC132479.1-201ENST00000449160 144 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC006026.2-201ENST00000457376 180 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 RPL23AP94-201ENST00000512518 302 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DMAP28067 RNA5SP445-201ENST00000515889 115 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 RNVU1-2-201ENST00000516326 135 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 SNORA31.16-201ENST00000516773 139 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 COPS8P3-201ENST00000526024 482 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC023050.3-201ENST00000541142 333 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC145350.1-201ENST00000567426 208 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC008752.3-201ENST00000588113 712 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC040904.1-201ENST00000590850 223 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC245014.2-201ENST00000603689 287 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC246785.4-201ENST00000605374 287 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC008945.2-201ENST00000606056 604 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC006566.1-201ENST00000608943 513 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC009318.2-201ENST00000610917 651 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DMAP28067 AC241585.2-209ENST00000638217 143 ntBASIC1.23□□□□□ -2.21
HLA-DMAP28067 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HLA-DMAP28067 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 Y_RNA.159-201ENST00000363674 87 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 Y_RNA.381-201ENST00000365666 102 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 RNU5A-2P-201ENST00000384337 116 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 RNU6-1222P-201ENST00000384615 107 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 MIR29B2-201ENST00000385055 81 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 AL358453.1-201ENST00000422522 250 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC010975.2-201ENST00000427781 588 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC133104.1-201ENST00000429100 218 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms