Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 SNORD115-8-201ENST00000363856 82 ntBASIC3.3□□□□□ -1.88
APEX1P27695 SNORD115-38-201ENST00000365037 82 ntBASIC3.3□□□□□ -1.88
APEX1P27695 Y_RNA.515-201ENST00000384535 112 ntBASIC3.3□□□□□ -1.88
APEX1P27695 RNU6-748P-201ENST00000384648 107 ntBASIC3.3□□□□□ -1.88
APEX1P27695 MIR449B-201ENST00000384995 97 ntBASIC3.3□□□□□ -1.88
APEX1P27695 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.3□□□□□ -1.88
APEX1P27695 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.3□□□□□ -1.88
APEX1P27695 AC006989.1-201ENST00000427212 131 ntBASIC3.3□□□□□ -1.88
APEX1P27695 AL591419.1-201ENST00000427423 339 ntBASIC3.3□□□□□ -1.88
APEX1P27695 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.3□□□□□ -1.88
APEX1P27695 RNA5SP164-201ENST00000516533 110 ntBASIC3.3□□□□□ -1.88
APEX1P27695 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
APEX1P27695 RNU6-1198P-201ENST00000516904 67 ntBASIC3.3□□□□□ -1.88
APEX1P27695 AC105137.2-201ENST00000569073 466 ntBASIC3.3□□□□□ -1.88
APEX1P27695 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.3□□□□□ -1.88
APEX1P27695 SNORD98-201ENST00000636377 67 ntBASIC3.3□□□□□ -1.88
APEX1P27695 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.3□□□□□ -1.88
APEX1P27695 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APEX1P27695 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
APEX1P27695 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APEX1P27695 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APEX1P27695 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.29□□□□□ -1.88
APEX1P27695 Y_RNA.20-201ENST00000362479 113 ntBASIC3.29□□□□□ -1.88
APEX1P27695 RNA5SP124-201ENST00000362739 110 ntBASIC3.29□□□□□ -1.88
APEX1P27695 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.29□□□□□ -1.88
APEX1P27695 MIR329-1-201ENST00000385028 80 ntBASIC3.29□□□□□ -1.88
APEX1P27695 AC138623.1-201ENST00000418060 216 ntBASIC3.29□□□□□ -1.88
APEX1P27695 SETP5-201ENST00000437270 562 ntBASIC3.29□□□□□ -1.88
APEX1P27695 AC005002.2-201ENST00000438228 269 ntBASIC3.29□□□□□ -1.88
APEX1P27695 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.29□□□□□ -1.88
APEX1P27695 RNU6-496P-201ENST00000516145 99 ntBASIC3.29□□□□□ -1.88
APEX1P27695 SNORA31.6-201ENST00000516241 130 ntBASIC3.29□□□□□ -1.88
APEX1P27695 SCARNA24.2-201ENST00000516968 130 ntBASIC3.29□□□□□ -1.88
APEX1P27695 AC115990.1-201ENST00000526957 301 ntBASIC3.29□□□□□ -1.88
APEX1P27695 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.29□□□□□ -1.88
APEX1P27695 TGIF1P1-201ENST00000558095 802 ntBASIC3.29□□□□□ -1.88
APEX1P27695 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.29□□□□□ -1.88
APEX1P27695 AC087499.8-201ENST00000578406 226 ntBASIC3.29□□□□□ -1.88
APEX1P27695 RPS15AP11-201ENST00000594193 385 ntBASIC3.29□□□□□ -1.88
APEX1P27695 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.29□□□□□ -1.88
APEX1P27695 AL137843.1-201ENST00000605078 385 ntBASIC3.29□□□□□ -1.88
APEX1P27695 SNORA62.6-201ENST00000606322 83 ntBASIC3.29□□□□□ -1.88
APEX1P27695 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
APEX1P27695 AL121772.2-201ENST00000614331 297 ntBASIC3.29□□□□□ -1.88
APEX1P27695 AC012442.3-202ENST00000636742 206 ntBASIC3.29□□□□□ -1.88
APEX1P27695 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
APEX1P27695 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
APEX1P27695 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APEX1P27695 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APEX1P27695 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APEX1P27695 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APEX1P27695 MFSD8-236ENST00000641509 4050 ntBASIC3.29□□□□□ -1.88
APEX1P27695 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.28□□□□□ -1.88
APEX1P27695 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.28□□□□□ -1.88
APEX1P27695 AL161912.2-201ENST00000565707 3007 ntBASIC3.28□□□□□ -1.88
APEX1P27695 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.28□□□□□ -1.88
APEX1P27695 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
APEX1P27695 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.28□□□□□ -1.88
APEX1P27695 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
APEX1P27695 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APEX1P27695 SNORA71.3-201ENST00000362582 128 ntBASIC3.28□□□□□ -1.88
APEX1P27695 Y_RNA.54-201ENST00000362766 105 ntBASIC3.28□□□□□ -1.88
APEX1P27695 RNU6-873P-201ENST00000363833 107 ntBASIC3.28□□□□□ -1.88
APEX1P27695 AP002088.1-201ENST00000382740 395 ntBASIC3.28□□□□□ -1.88
APEX1P27695 MIR7-3-201ENST00000384898 110 ntBASIC3.28□□□□□ -1.88
APEX1P27695 MIR549A-201ENST00000385268 96 ntBASIC3.28□□□□□ -1.88
APEX1P27695 MIR147B-201ENST00000390185 80 ntBASIC3.28□□□□□ -1.88
APEX1P27695 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APEX1P27695 AL603910.2-201ENST00000407268 136 ntBASIC3.28□□□□□ -1.88
APEX1P27695 YME1L1P1-201ENST00000429435 297 ntBASIC3.28□□□□□ -1.88
APEX1P27695 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.28□□□□□ -1.88
APEX1P27695 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.28□□□□□ -1.88
APEX1P27695 snoU13.22-201ENST00000459428 104 ntBASIC3.28□□□□□ -1.88
APEX1P27695 AC110768.1-201ENST00000509222 400 ntBASIC3.28□□□□□ -1.88
APEX1P27695 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.28□□□□□ -1.88
APEX1P27695 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
APEX1P27695 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.28□□□□□ -1.88
APEX1P27695 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APEX1P27695 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.27□□□□□ -1.89
APEX1P27695 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APEX1P27695 PWAR6-201ENST00000552334 4618 ntBASIC3.27□□□□□ -1.89
APEX1P27695 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
APEX1P27695 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APEX1P27695 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
APEX1P27695 RNU6-529P-201ENST00000363383 104 ntBASIC3.27□□□□□ -1.89
APEX1P27695 RNU6-338P-201ENST00000383888 105 ntBASIC3.27□□□□□ -1.89
APEX1P27695 RNU6-1145P-201ENST00000384246 107 ntBASIC3.27□□□□□ -1.89
APEX1P27695 SNORD63-201ENST00000384262 68 ntBASIC3.27□□□□□ -1.89
APEX1P27695 Y_RNA.539-201ENST00000384635 107 ntBASIC3.27□□□□□ -1.89
APEX1P27695 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
APEX1P27695 RNU6-750P-201ENST00000390946 107 ntBASIC3.27□□□□□ -1.89
APEX1P27695 RPS26P42-201ENST00000413485 326 ntBASIC3.27□□□□□ -1.89
APEX1P27695 NDUFB1P1-201ENST00000435191 180 ntBASIC3.27□□□□□ -1.89
APEX1P27695 HSPE1P25-201ENST00000455484 251 ntBASIC3.27□□□□□ -1.89
APEX1P27695 AL139109.1-201ENST00000455491 297 ntBASIC3.27□□□□□ -1.89
APEX1P27695 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.27□□□□□ -1.89
APEX1P27695 AL031183.1-201ENST00000457667 207 ntBASIC3.27□□□□□ -1.89
APEX1P27695 AL441985.1-201ENST00000457727 251 ntBASIC3.27□□□□□ -1.89
APEX1P27695 U3.44-201ENST00000458938 192 ntBASIC3.27□□□□□ -1.89
APEX1P27695 AC010401.1-201ENST00000463867 348 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms