Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CASC19-280ENST00000642102 1351 ntBASIC1.97□□□□□ -2.09
GDF1P27539 SNORD56.1-201ENST00000362913 68 ntBASIC1.96□□□□□ -2.1
GDF1P27539 Y_RNA.135-201ENST00000363439 95 ntBASIC1.96□□□□□ -2.1
GDF1P27539 SNORD113-7-201ENST00000363762 77 ntBASIC1.96□□□□□ -2.1
GDF1P27539 RNU6-1329P-201ENST00000365664 107 ntBASIC1.96□□□□□ -2.1
GDF1P27539 SNORA64-201ENST00000384674 134 ntBASIC1.96□□□□□ -2.1
GDF1P27539 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
GDF1P27539 MIR450B-201ENST00000401182 78 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AL356776.1-201ENST00000406574 447 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.96□□□□□ -2.1
GDF1P27539 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.96□□□□□ -2.1
GDF1P27539 FABP5P14-201ENST00000437273 393 ntBASIC1.96□□□□□ -2.1
GDF1P27539 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
GDF1P27539 AL359672.1-201ENST00000442302 409 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AL031659.1-201ENST00000447075 539 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC006026.2-201ENST00000457376 180 ntBASIC1.96□□□□□ -2.1
GDF1P27539 YWHAEP4-201ENST00000505390 198 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC018710.1-201ENST00000506509 158 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.96□□□□□ -2.1
GDF1P27539 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.96□□□□□ -2.1
GDF1P27539 AL117351.2-201ENST00000513571 157 ntBASIC1.96□□□□□ -2.1
GDF1P27539 SNORA25.11-201ENST00000515935 105 ntBASIC1.96□□□□□ -2.1
GDF1P27539 RNU6-377P-201ENST00000515965 102 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.96□□□□□ -2.1
GDF1P27539 AC109479.2-201ENST00000517842 174 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.96□□□□□ -2.1
GDF1P27539 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.96□□□□□ -2.1
GDF1P27539 IGKV3-31-201ENST00000523109 329 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC087241.2-201ENST00000535801 324 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC090897.2-201ENST00000581715 130 ntBASIC1.96□□□□□ -2.1
GDF1P27539 MIR3672-201ENST00000584290 82 ntBASIC1.96□□□□□ -2.1
GDF1P27539 DUXAP9-208ENST00000622815 614 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AL359854.1-201ENST00000614203 1594 ntBASIC1.96□□□□□ -2.1
GDF1P27539 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.96□□□□□ -2.1
GDF1P27539 AC010329.5-201ENST00000623497 2174 ntBASIC1.95□□□□□ -2.1
GDF1P27539 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.95□□□□□ -2.1
GDF1P27539 RNU1-72P-201ENST00000362976 153 ntBASIC1.95□□□□□ -2.1
GDF1P27539 RNU6-692P-201ENST00000384496 107 ntBASIC1.95□□□□□ -2.1
GDF1P27539 VN1R36P-201ENST00000414936 291 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.95□□□□□ -2.1
GDF1P27539 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.95□□□□□ -2.1
GDF1P27539 RPL30P4-201ENST00000429309 333 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AL365400.1-201ENST00000431854 640 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AL121890.1-201ENST00000435457 205 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC243964.1-201ENST00000441814 261 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC008628.2-201ENST00000502605 298 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.95□□□□□ -2.1
GDF1P27539 RPL39P5-202ENST00000512505 151 ntBASIC1.95□□□□□ -2.1
GDF1P27539 RNU6-1332P-201ENST00000516666 104 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC104576.1-201ENST00000524225 88 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.95□□□□□ -2.1
GDF1P27539 MIR4765-201ENST00000585007 77 ntBASIC1.95□□□□□ -2.1
GDF1P27539 BNIP3P10-201ENST00000605360 577 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
GDF1P27539 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.95□□□□□ -2.1
GDF1P27539 AL138726.1-201ENST00000614873 333 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC009248.2-201ENST00000619826 254 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC024581.2-201ENST00000619986 252 ntBASIC1.95□□□□□ -2.1
GDF1P27539 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
GDF1P27539 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.94□□□□□ -2.1
GDF1P27539 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.94□□□□□ -2.1
GDF1P27539 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
GDF1P27539 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
GDF1P27539 Y_RNA.40-201ENST00000362645 93 ntBASIC1.94□□□□□ -2.1
GDF1P27539 RNU6-529P-201ENST00000363383 104 ntBASIC1.94□□□□□ -2.1
GDF1P27539 Y_RNA.279-201ENST00000364763 95 ntBASIC1.94□□□□□ -2.1
GDF1P27539 MT-TL1-201ENST00000386347 75 ntBASIC1.94□□□□□ -2.1
GDF1P27539 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
GDF1P27539 SNORD23.1-201ENST00000408212 104 ntBASIC1.94□□□□□ -2.1
GDF1P27539 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.94□□□□□ -2.1
GDF1P27539 MTCO2P3-201ENST00000442543 421 ntBASIC1.94□□□□□ -2.1
GDF1P27539 AC112771.1-201ENST00000463581 102 ntBASIC1.94□□□□□ -2.1
GDF1P27539 RPL36AP48-201ENST00000485521 314 ntBASIC1.94□□□□□ -2.1
GDF1P27539 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.94□□□□□ -2.1
GDF1P27539 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.94□□□□□ -2.1
GDF1P27539 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.94□□□□□ -2.1
GDF1P27539 RNU4-49P-201ENST00000516080 140 ntBASIC1.94□□□□□ -2.1
GDF1P27539 RNU6-864P-201ENST00000516256 108 ntBASIC1.94□□□□□ -2.1
GDF1P27539 RNU6-256P-201ENST00000516747 97 ntBASIC1.94□□□□□ -2.1
GDF1P27539 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.94□□□□□ -2.1
GDF1P27539 SCOCP1-201ENST00000554676 349 ntBASIC1.94□□□□□ -2.1
GDF1P27539 AC100830.2-201ENST00000581636 240 ntBASIC1.94□□□□□ -2.1
GDF1P27539 MIR4801-201ENST00000582704 82 ntBASIC1.94□□□□□ -2.1
GDF1P27539 AC244517.12-201ENST00000623581 663 ntBASIC1.94□□□□□ -2.1
GDF1P27539 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
GDF1P27539 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
GDF1P27539 MTND4P27-201ENST00000450813 1354 ntBASIC1.94□□□□□ -2.1
GDF1P27539 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
GDF1P27539 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
GDF1P27539 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.93□□□□□ -2.1
GDF1P27539 RNU6-1010P-201ENST00000362757 107 ntBASIC1.93□□□□□ -2.1
GDF1P27539 RNU6-527P-201ENST00000363425 104 ntBASIC1.93□□□□□ -2.1
GDF1P27539 Y_RNA.301-201ENST00000364990 103 ntBASIC1.93□□□□□ -2.1
GDF1P27539 SNORA32.2-201ENST00000384049 122 ntBASIC1.93□□□□□ -2.1
GDF1P27539 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
GDF1P27539 SNORA51.11-201ENST00000384442 131 ntBASIC1.93□□□□□ -2.1
GDF1P27539 RNU6-220P-201ENST00000390919 107 ntBASIC1.93□□□□□ -2.1
GDF1P27539 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
GDF1P27539 RNA5SP390-201ENST00000410191 113 ntBASIC1.93□□□□□ -2.1
GDF1P27539 RNU6-293P-201ENST00000411259 106 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms