Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.19□□□□□ -2.22
COL5A3P25940 RNU6-1280P-201ENST00000365211 107 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 Y_RNA.436-201ENST00000384097 102 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 RNU6-1029P-201ENST00000384109 107 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 RNU6-456P-201ENST00000384493 107 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 Y_RNA.553-201ENST00000384670 102 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 SNORA40C-201ENST00000391285 128 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.19□□□□□ -2.22
COL5A3P25940 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.19□□□□□ -2.22
COL5A3P25940 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.19□□□□□ -2.22
COL5A3P25940 AC104651.1-201ENST00000427559 735 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A3P25940 AL441985.1-201ENST00000457727 251 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 RNU6-956P-201ENST00000458868 103 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A3P25940 AC087884.1-201ENST00000469738 328 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A3P25940 RNU6-1220P-201ENST00000517126 108 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 RNA5SP165-201ENST00000517142 115 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 OR5B19P-201ENST00000531766 928 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A3P25940 MIR4698-201ENST00000577795 80 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.19□□□□□ -2.22
COL5A3P25940 AC008121.1-201ENST00000603244 268 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 DPPA3P3-201ENST00000603842 430 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AC008945.2-201ENST00000606056 604 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AC103591.3-201ENST00000608684 209 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AC006566.1-201ENST00000608943 513 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 MIR6857-201ENST00000613267 93 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL5A3P25940 AC093648.1-201ENST00000623546 606 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.19□□□□□ -2.22
COL5A3P25940 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL5A3P25940 AC008555.8-201ENST00000623602 2168 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AC091812.1-201ENST00000432235 1948 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL5A3P25940 Y_RNA.85-201ENST00000363014 111 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-1097P-201ENST00000363586 107 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 Y_RNA.318-201ENST00000365131 97 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-641P-201ENST00000384006 107 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-1103P-201ENST00000384150 107 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 Y_RNA.576-201ENST00000384781 102 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 U6atac.2-201ENST00000408644 118 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AL109913.1-201ENST00000421173 514 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.18□□□□□ -2.22
COL5A3P25940 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.18□□□□□ -2.22
COL5A3P25940 GPR143P-201ENST00000434155 205 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AL353706.1-201ENST00000436728 494 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AL022238.1-201ENST00000442557 355 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 BRK1P2-201ENST00000442875 223 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.18□□□□□ -2.22
COL5A3P25940 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.18□□□□□ -2.22
COL5A3P25940 HSPE1P24-201ENST00000450782 238 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-953P-201ENST00000459154 107 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.18□□□□□ -2.22
COL5A3P25940 AC104806.1-201ENST00000508720 308 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-581P-201ENST00000516214 105 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 SNORA31.25-201ENST00000517242 134 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL5A3P25940 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.18□□□□□ -2.22
COL5A3P25940 AC008521.1-201ENST00000587471 187 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AL590095.2-201ENST00000604136 117 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 uc_338.11-201ENST00000619132 160 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC138649.3-201ENST00000622154 254 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC092656.1-203ENST00000624134 423 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 Z99571.1-201ENST00000636677 394 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.18□□□□□ -2.22
COL5A3P25940 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.18□□□□□ -2.22
COL5A3P25940 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
COL5A3P25940 Y_RNA.296-201ENST00000364930 108 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-116P-201ENST00000384042 109 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 SNORA75-201ENST00000384158 137 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-1042P-201ENST00000384204 107 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-348P-201ENST00000384386 107 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 SNORA24.1-201ENST00000384401 135 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 MIR147B-201ENST00000390185 80 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RNU6-248P-201ENST00000410720 107 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 MTCO3P41-201ENST00000414801 328 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RPL21P90-201ENST00000415692 466 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 DLGAP5P1-201ENST00000430307 464 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 MTCO2P11-201ENST00000431069 680 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.18□□□□□ -2.22
COL5A3P25940 RPL36AP53-201ENST00000432891 316 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 MTATP6P16-201ENST00000434543 526 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 FABP5P14-201ENST00000437273 393 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 RPS24P1-201ENST00000438550 371 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.18□□□□□ -2.22
COL5A3P25940 AC023141.11-201ENST00000508864 202 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.18□□□□□ -2.22
COL5A3P25940 RNU2-19P-201ENST00000517288 84 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AP003392.2-201ENST00000527269 208 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AP003072.2-201ENST00000527756 676 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC118273.2-201ENST00000532092 465 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.18□□□□□ -2.22
COL5A3P25940 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.18□□□□□ -2.22
COL5A3P25940 AC024909.2-201ENST00000553035 286 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AL157871.3-201ENST00000557231 293 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms