Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SNRPEP10-201ENST00000420249 274 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.44□□□□□ -2.18
COL5A1P20908 MTATP6P23-201ENST00000440153 476 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 NEFMP1-201ENST00000443423 1006 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AC073415.1-201ENST00000449240 153 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 COX6CP14-201ENST00000469580 174 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 RN7SL274P-201ENST00000492268 272 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.44□□□□□ -2.18
COL5A1P20908 AC091885.1-201ENST00000506658 268 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AC074344.1-201ENST00000512823 224 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 RNU6-390P-201ENST00000516259 103 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 SCARNA24.1-201ENST00000516465 137 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 RNU7-30P-201ENST00000516835 62 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A1P20908 AC025755.1-201ENST00000521306 278 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 OR5B19P-201ENST00000531766 928 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 ANP32BP3-201ENST00000559213 706 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 MIR548S-201ENST00000581352 82 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A1P20908 AC010525.2-201ENST00000590920 195 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AL117336.2-201ENST00000602435 335 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AC104260.1-201ENST00000616660 539 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A1P20908 AC009033.1-201ENST00000624279 431 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AC090617.10-201ENST00000624308 134 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.44□□□□□ -2.18
COL5A1P20908 CDC27P3-201ENST00000635418 1910 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 AL139397.2-201ENST00000404529 772 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AL355497.1-201ENST00000406262 551 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RPL36AP53-201ENST00000432891 316 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC098614.3-201ENST00000438957 440 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A1P20908 AL139109.1-201ENST00000455491 297 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 MTCYBP18-201ENST00000501056 747 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC113155.1-201ENST00000511141 769 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A1P20908 SCARNA15.2-201ENST00000516409 127 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU6-875P-201ENST00000516488 106 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU6-1069P-201ENST00000516612 133 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.43□□□□□ -2.18
COL5A1P20908 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A1P20908 MIR5194-201ENST00000582634 120 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AF038458.1-201ENST00000588406 262 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AL138889.2-201ENST00000603883 242 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC080078.3-201ENST00000605407 463 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC025253.1-201ENST00000613623 543 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 TUG1_2.1-201ENST00000614234 87 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC092794.2-201ENST00000620933 563 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC006504.8-201ENST00000621046 635 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC099654.14-201ENST00000638599 341 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 CASC19-280ENST00000642102 1351 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COL5A1P20908 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A1P20908 Y_RNA.231-201ENST00000364358 102 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 Y_RNA.245-201ENST00000364493 95 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 SNORA32.2-201ENST00000384049 122 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU6-434P-201ENST00000384376 107 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 SNORA24.1-201ENST00000384401 135 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 MIR325-201ENST00000385260 98 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNA5SP252-201ENST00000391131 119 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL5A1P20908 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 RNU6-908P-201ENST00000410160 94 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU2-36P-201ENST00000410361 191 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU4-46P-201ENST00000410818 138 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A1P20908 RPL21P111-201ENST00000418453 477 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AL513185.2-201ENST00000425543 193 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 ERLEC1P1-201ENST00000433806 578 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 TAAR7P-201ENST00000436141 242 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 Z82210.1-201ENST00000440037 231 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 snoU13.4-201ENST00000458916 104 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A1P20908 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A1P20908 RPL7P43-201ENST00000478876 753 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC092989.1-201ENST00000481235 277 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RPS15AP34-201ENST00000487776 387 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AL160314.1-201ENST00000490836 438 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A1P20908 HMGB3P3-201ENST00000510526 400 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU6-798P-201ENST00000516912 103 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU6-1315P-201ENST00000517187 99 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A1P20908 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A1P20908 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A1P20908 AC005498.1-201ENST00000592125 465 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC009994.1-201ENST00000606889 253 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 FTX_3.1-201ENST00000610451 147 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 AC022306.2-201ENST00000617563 647 ntBASIC1.43□□□□□ -2.18
COL5A1P20908 RNU4-73P-201ENST00000363164 141 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 Y_RNA.378-201ENST00000365652 113 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 RNU6-1127P-201ENST00000384580 107 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 Y_RNA.573-201ENST00000384763 105 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms