Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC015712.3-201ENST00000559380 164 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.86□□□□□ -2.11
XRCC1P18887 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.86□□□□□ -2.11
XRCC1P18887 MIR4524B-201ENST00000581569 115 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AP001330.5-201ENST00000607176 411 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
XRCC1P18887 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.86□□□□□ -2.11
XRCC1P18887 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
XRCC1P18887 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
XRCC1P18887 AP000560.1-201ENST00000624150 1937 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
XRCC1P18887 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
XRCC1P18887 RNU6-1285P-201ENST00000363480 105 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 RNU6-1141P-201ENST00000364520 107 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 RNU6-336P-201ENST00000364891 107 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 HMGN2P39-201ENST00000398005 273 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AL606923.1-201ENST00000406616 190 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.85□□□□□ -2.11
XRCC1P18887 AL353193.1-201ENST00000421444 268 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 CBX3P6-201ENST00000430257 527 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 MTND1P29-201ENST00000448112 647 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AL137159.1-201ENST00000452808 512 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AL353752.1-201ENST00000454946 260 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AL122001.1-201ENST00000457027 370 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 MRPS17P9-201ENST00000511924 393 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.85□□□□□ -2.11
XRCC1P18887 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 RNU6-667P-201ENST00000517186 102 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 RNU2-19P-201ENST00000517288 84 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC107953.1-201ENST00000522216 297 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AP003392.2-201ENST00000527269 208 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.85□□□□□ -2.11
XRCC1P18887 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.85□□□□□ -2.11
XRCC1P18887 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.85□□□□□ -2.11
XRCC1P18887 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC103987.3-201ENST00000582071 292 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC011494.1-201ENST00000596454 237 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AL031274.2-201ENST00000599419 203 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC123912.5-201ENST00000605470 343 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 AC097372.5-201ENST00000623665 376 ntBASIC1.85□□□□□ -2.11
XRCC1P18887 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
XRCC1P18887 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
XRCC1P18887 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.84□□□□□ -2.11
XRCC1P18887 Y_RNA.51-201ENST00000362725 102 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 RNU6-1322P-201ENST00000364309 107 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
XRCC1P18887 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
XRCC1P18887 SNORA40.18-201ENST00000391200 128 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AC068050.1-201ENST00000394891 380 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AL117339.3-201ENST00000418733 162 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 EIF1AXP1-201ENST00000419267 435 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 RPS15AP10-201ENST00000432472 382 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AL606489.2-201ENST00000433886 234 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.84□□□□□ -2.11
XRCC1P18887 AC245102.2-201ENST00000448956 180 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.84□□□□□ -2.11
XRCC1P18887 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.84□□□□□ -2.11
XRCC1P18887 AC055731.1-201ENST00000474387 401 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AP005136.1-201ENST00000579765 429 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 MIR3136-201ENST00000583498 78 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 MIR4424-201ENST00000585257 86 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AC007229.1-201ENST00000590455 412 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.84□□□□□ -2.11
XRCC1P18887 AC018889.1-201ENST00000605372 397 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
XRCC1P18887 MIR6845-201ENST00000613182 61 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AC139792.3-201ENST00000623525 224 ntBASIC1.84□□□□□ -2.11
XRCC1P18887 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
XRCC1P18887 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
XRCC1P18887 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
XRCC1P18887 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
XRCC1P18887 MTND5P26-201ENST00000426018 1752 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 snoU2_19.1-201ENST00000362361 80 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 RNU6-82P-201ENST00000363970 107 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 U3.13-201ENST00000364804 214 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 RNU6-259P-201ENST00000383999 107 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 MIR29C-201ENST00000385231 88 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 MIR764-201ENST00000390811 85 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 RNU6-1106P-201ENST00000390845 107 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 RNU2-48P-201ENST00000410694 191 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 AC078809.1-201ENST00000427601 140 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 TIMM9P3-201ENST00000428659 274 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 RPL7P54-201ENST00000438336 674 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.83□□□□□ -2.12
XRCC1P18887 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.83□□□□□ -2.12
XRCC1P18887 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.83□□□□□ -2.12
XRCC1P18887 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.83□□□□□ -2.12
XRCC1P18887 RNU6-261P-201ENST00000459506 102 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 AC083798.1-201ENST00000472671 131 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.83□□□□□ -2.12
XRCC1P18887 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
XRCC1P18887 RNU5F-2P-201ENST00000516066 82 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.83□□□□□ -2.12
XRCC1P18887 AC090115.3-201ENST00000553218 849 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.83□□□□□ -2.12
XRCC1P18887 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.83□□□□□ -2.12
XRCC1P18887 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms