Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PTPN1P18031 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN1P18031 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN1P18031 RNU6-212P-201ENST00000362642 104 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 RNU5B-2P-201ENST00000363036 113 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 RNU6-1141P-201ENST00000364520 107 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN1P18031 RNU6-843P-201ENST00000384454 104 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 Y_RNA.518-201ENST00000384552 113 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 EI24P2-201ENST00000397776 1076 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 Z98949.2-201ENST00000440996 144 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 RPL39P38-201ENST00000467018 153 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 AC107222.1-201ENST00000510899 637 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 RNU5F-8P-201ENST00000515941 111 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 ACA59.2-201ENST00000517061 156 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 CKS1BP7-201ENST00000522230 235 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
PTPN1P18031 HSPE1P4-201ENST00000550617 308 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 AC007375.1-201ENST00000554513 578 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 TGIF1P1-201ENST00000558095 802 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 AC078938.1-201ENST00000620993 318 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 AF117829.1-206ENST00000621883 3802 ntBASIC3.53□□□□□ -1.84
PTPN1P18031 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.85
PTPN1P18031 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN1P18031 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PTPN1P18031 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN1P18031 RNU6-1301P-201ENST00000362724 104 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 Y_RNA.552-201ENST00000384665 112 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 Y_RNA.562-201ENST00000384695 113 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PTPN1P18031 SNORD78.2-201ENST00000391076 69 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 UBA52P6-201ENST00000399822 382 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.52□□□□□ -1.85
PTPN1P18031 GPM6BP3-201ENST00000442797 145 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 BX510359.1-201ENST00000456973 237 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 AC098869.1-201ENST00000481627 292 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 AP001025.1-201ENST00000486139 332 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 AC016632.1-201ENST00000503994 196 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 MIR2276-201ENST00000516886 89 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.52□□□□□ -1.85
PTPN1P18031 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.52□□□□□ -1.85
PTPN1P18031 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.52□□□□□ -1.85
PTPN1P18031 MIR5571-201ENST00000577998 113 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 MIR3128-201ENST00000581957 66 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 Y_RNA.772-201ENST00000606692 102 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 MIR376A1-201ENST00000616574 68 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.52□□□□□ -1.85
PTPN1P18031 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN1P18031 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN1P18031 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.52□□□□□ -1.85
PTPN1P18031 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN1P18031 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PTPN1P18031 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PTPN1P18031 AC091152.2-201ENST00000591628 2569 ntBASIC3.52□□□□□ -1.85
PTPN1P18031 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PTPN1P18031 MIR491-201ENST00000384877 84 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 RNU1-139P-201ENST00000391307 165 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN1P18031 RN7SKP61-201ENST00000410642 295 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 RNU2-25P-201ENST00000411041 191 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 AC096920.1-201ENST00000423991 241 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 SSXP4-201ENST00000451349 245 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 CENPBD1P1-201ENST00000464061 469 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 RN7SL807P-201ENST00000470923 297 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 AP000870.1-201ENST00000472927 406 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 RPS4XP22-201ENST00000480755 780 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 MTND1P19-201ENST00000511780 315 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN1P18031 RNU6-1012P-201ENST00000516606 109 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 MIR3200-201ENST00000580767 85 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 AC073410.2-201ENST00000603240 332 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN1P18031 AC240442.1-201ENST00000616055 283 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 MIR7112-201ENST00000616126 65 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 AC137590.2-201ENST00000619709 240 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 SDR42E1P4-201ENST00000620894 481 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 AC091953.5-201ENST00000622919 233 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPN1P18031 AC073346.2-201ENST00000624724 2058 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN1P18031 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN1P18031 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.51□□□□□ -1.85
PTPN1P18031 MTND5P6-201ENST00000422338 1798 ntBASIC3.51□□□□□ -1.85
PTPN1P18031 AC058791.1-201ENST00000608412 3198 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN1P18031 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN1P18031 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 RNU1-70P-201ENST00000362618 164 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 Y_RNA.60-201ENST00000362831 98 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 Y_RNA.84-201ENST00000363011 104 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 RNU6-487P-201ENST00000365430 104 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 U3.19-201ENST00000390893 196 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 SNORD115-46-201ENST00000390982 71 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 RNU6-1093P-201ENST00000391194 107 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN1P18031 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN1P18031 EIF1P2-201ENST00000428233 350 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 AL161651.1-201ENST00000440882 223 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 AC016700.2-201ENST00000446011 156 ntBASIC3.5□□□□□ -1.85
PTPN1P18031 Z75741.1-201ENST00000446793 314 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms