Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.43□□□□□ -2.48
HMGA1P17096 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.43□□□□□ -2.48
HMGA1P17096 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.43□□□□□ -2.48
HMGA1P17096 AC069257.2-201ENST00000441819 155 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 RNU7-21P-201ENST00000459430 62 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 AL049830.1-201ENST00000468034 425 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.43□□□□□ -2.48
HMGA1P17096 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.43□□□□□ -2.48
HMGA1P17096 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.43□□□□□ -2.48
HMGA1P17096 AC116165.2-201ENST00000616705 206 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.43□□□□□ -2.48
HMGA1P17096 RNU6-529P-201ENST00000363383 104 ntBASIC-0.44□□□□□ -2.48
HMGA1P17096 SNORA63D-201ENST00000364359 132 ntBASIC-0.44□□□□□ -2.48
HMGA1P17096 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.44□□□□□ -2.48
HMGA1P17096 SNORA8.3-201ENST00000384679 139 ntBASIC-0.44□□□□□ -2.48
HMGA1P17096 AL451054.2-201ENST00000420896 202 ntBASIC-0.44□□□□□ -2.48
HMGA1P17096 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.44□□□□□ -2.48
HMGA1P17096 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.44□□□□□ -2.48
HMGA1P17096 AC116347.2-201ENST00000514912 523 ntBASIC-0.44□□□□□ -2.48
HMGA1P17096 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.44□□□□□ -2.48
HMGA1P17096 MIR4709-201ENST00000577272 72 ntBASIC-0.44□□□□□ -2.48
HMGA1P17096 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
HMGA1P17096 RNU6-543P-201ENST00000362576 108 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 SNORD116-13-201ENST00000384408 92 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 MIR29B2-201ENST00000385055 81 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.45□□□□□ -2.48
HMGA1P17096 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 RPL31P54-201ENST00000429803 370 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 AC073910.1-201ENST00000445047 438 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 RPL18AP17-201ENST00000455326 198 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 RN7SKP287-201ENST00000516546 266 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 RNU6-703P-201ENST00000516946 107 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.45□□□□□ -2.48
HMGA1P17096 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.45□□□□□ -2.48
HMGA1P17096 AC137800.2-201ENST00000574375 120 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.45□□□□□ -2.48
HMGA1P17096 AC078795.2-201ENST00000602835 1252 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 AC080078.2-201ENST00000603766 501 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 Pinc.1-201ENST00000616452 154 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 AP000943.4-201ENST00000622912 357 ntBASIC-0.45□□□□□ -2.48
HMGA1P17096 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
HMGA1P17096 RNA5SP98-201ENST00000363158 137 ntBASIC-0.46□□□□□ -2.48
HMGA1P17096 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.46□□□□□ -2.48
HMGA1P17096 RNU6-654P-201ENST00000364373 107 ntBASIC-0.46□□□□□ -2.48
HMGA1P17096 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.46□□□□□ -2.48
HMGA1P17096 HMGN2P22-201ENST00000427588 175 ntBASIC-0.46□□□□□ -2.48
HMGA1P17096 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.46□□□□□ -2.48
HMGA1P17096 AC016717.1-201ENST00000448918 286 ntBASIC-0.46□□□□□ -2.48
HMGA1P17096 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.46□□□□□ -2.48
HMGA1P17096 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.46□□□□□ -2.48
HMGA1P17096 AL390237.1-201ENST00000404226 1415 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 RNU6-898P-201ENST00000365627 104 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 ELOCP9-201ENST00000418624 239 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.47□□□□□ -2.48
HMGA1P17096 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 USP9YP14-201ENST00000430663 563 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.47□□□□□ -2.48
HMGA1P17096 SEPT7P5-201ENST00000434048 306 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 SEPT7P4-201ENST00000437076 306 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 RNFT1P2-201ENST00000443064 757 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.47□□□□□ -2.48
HMGA1P17096 RNU6-333P-201ENST00000459117 107 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.47□□□□□ -2.48
HMGA1P17096 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
HMGA1P17096 AC023827.1-201ENST00000569247 97 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AP001180.6-201ENST00000584918 159 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AL592221.1-201ENST00000605266 382 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AL136317.1-201ENST00000612653 226 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AC063943.3-201ENST00000615562 356 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AC106754.2-201ENST00000623006 233 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AL078595.3-201ENST00000623815 1166 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.47□□□□□ -2.48
HMGA1P17096 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.47□□□□□ -2.48
HMGA1P17096 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.47□□□□□ -2.49
HMGA1P17096 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 RNU6-862P-201ENST00000362804 105 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
HMGA1P17096 AL357139.1-201ENST00000407792 426 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 C1DP2-201ENST00000418167 426 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 MTND4LP11-201ENST00000422184 280 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 MTCO3P29-201ENST00000432119 779 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 C1DP4-201ENST00000455429 424 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.48□□□□□ -2.49
HMGA1P17096 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.48□□□□□ -2.49
HMGA1P17096 AC093012.1-202ENST00000549403 582 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 MIR5695-201ENST00000579717 85 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.48□□□□□ -2.49
HMGA1P17096 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.48□□□□□ -2.49
HMGA1P17096 AC092634.7-201ENST00000621022 103 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 U6.99-201ENST00000637524 83 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 AC107982.1-201ENST00000507171 1300 ntBASIC-0.48□□□□□ -2.49
HMGA1P17096 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.49□□□□□ -2.49
HMGA1P17096 RNU6-105P-201ENST00000363909 104 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms