Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 Y_RNA.369-201ENST00000365568 117 ntBASIC3.99□□□□□ -1.77
NID1P14543 SNORD116-21-201ENST00000384507 92 ntBASIC3.99□□□□□ -1.77
NID1P14543 RNU6-1197P-201ENST00000391183 107 ntBASIC3.99□□□□□ -1.77
NID1P14543 SNORA57.1-201ENST00000391227 145 ntBASIC3.99□□□□□ -1.77
NID1P14543 SNORD66.1-201ENST00000391230 76 ntBASIC3.99□□□□□ -1.77
NID1P14543 EI24P2-201ENST00000397776 1076 ntBASIC3.99□□□□□ -1.77
NID1P14543 AC099548.1-201ENST00000421443 426 ntBASIC3.99□□□□□ -1.77
NID1P14543 MTCO1P44-201ENST00000441935 243 ntBASIC3.99□□□□□ -1.77
NID1P14543 AC146944.2-203ENST00000502493 354 ntBASIC3.99□□□□□ -1.77
NID1P14543 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.99□□□□□ -1.77
NID1P14543 AC139495.1-202ENST00000513164 354 ntBASIC3.99□□□□□ -1.77
NID1P14543 RNU6-1282P-201ENST00000516735 96 ntBASIC3.99□□□□□ -1.77
NID1P14543 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.99□□□□□ -1.77
NID1P14543 AC133485.4-201ENST00000561835 220 ntBASIC3.99□□□□□ -1.77
NID1P14543 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.99□□□□□ -1.77
NID1P14543 CYP4A43P-201ENST00000568156 121 ntBASIC3.99□□□□□ -1.77
NID1P14543 AC138907.4-201ENST00000570107 226 ntBASIC3.99□□□□□ -1.77
NID1P14543 AC090897.2-201ENST00000581715 130 ntBASIC3.99□□□□□ -1.77
NID1P14543 MIR3136-201ENST00000583498 78 ntBASIC3.99□□□□□ -1.77
NID1P14543 SNORD11B-201ENST00000607707 90 ntBASIC3.99□□□□□ -1.77
NID1P14543 SNORD98-201ENST00000636377 67 ntBASIC3.99□□□□□ -1.77
NID1P14543 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NID1P14543 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NID1P14543 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NID1P14543 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NID1P14543 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
NID1P14543 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NID1P14543 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.98□□□□□ -1.77
NID1P14543 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NID1P14543 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NID1P14543 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NID1P14543 RNU1-94P-201ENST00000362627 173 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNA5SP175-201ENST00000364275 119 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNU6-1082P-201ENST00000364574 107 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNU6-597P-201ENST00000365620 102 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNU6-32P-201ENST00000383948 107 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNY3P5-201ENST00000384127 102 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNU6-13P-201ENST00000384248 107 ntBASIC3.98□□□□□ -1.77
NID1P14543 Y_RNA.495-201ENST00000384435 112 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNU6-12P-201ENST00000384604 107 ntBASIC3.98□□□□□ -1.77
NID1P14543 RNU6-41P-201ENST00000384741 107 ntBASIC3.98□□□□□ -1.77
NID1P14543 MIR134-201ENST00000385258 73 ntBASIC3.98□□□□□ -1.77
NID1P14543 SNORA11F-201ENST00000408237 128 ntBASIC3.98□□□□□ -1.77
NID1P14543 Y_RNA.651-201ENST00000459380 103 ntBASIC3.98□□□□□ -1.77
NID1P14543 Y_RNA.692-201ENST00000516627 105 ntBASIC3.98□□□□□ -1.77
NID1P14543 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.98□□□□□ -1.77
NID1P14543 AC007224.1-201ENST00000564410 144 ntBASIC3.98□□□□□ -1.77
NID1P14543 AL451007.1-201ENST00000595491 289 ntBASIC3.98□□□□□ -1.77
NID1P14543 VN1R85P-201ENST00000601587 426 ntBASIC3.98□□□□□ -1.77
NID1P14543 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.98□□□□□ -1.77
NID1P14543 uc_338.13-201ENST00000618243 179 ntBASIC3.98□□□□□ -1.77
NID1P14543 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NID1P14543 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NID1P14543 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NID1P14543 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NID1P14543 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NID1P14543 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.98□□□□□ -1.77
NID1P14543 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NID1P14543 AC008555.8-201ENST00000623602 2168 ntBASIC3.97□□□□□ -1.77
NID1P14543 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NID1P14543 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NID1P14543 RNU6-884P-201ENST00000363889 107 ntBASIC3.97□□□□□ -1.77
NID1P14543 RNU6-487P-201ENST00000365430 104 ntBASIC3.97□□□□□ -1.77
NID1P14543 U1.1-201ENST00000384101 164 ntBASIC3.97□□□□□ -1.77
NID1P14543 NDUFS5P4-201ENST00000412983 318 ntBASIC3.97□□□□□ -1.77
NID1P14543 CYCSP49-201ENST00000420810 319 ntBASIC3.97□□□□□ -1.77
NID1P14543 AC011998.1-201ENST00000433403 117 ntBASIC3.97□□□□□ -1.77
NID1P14543 HLA-N-201ENST00000437516 135 ntBASIC3.97□□□□□ -1.77
NID1P14543 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.97□□□□□ -1.77
NID1P14543 RPL30P5-201ENST00000494923 336 ntBASIC3.97□□□□□ -1.77
NID1P14543 SNORA31.9-201ENST00000516429 84 ntBASIC3.97□□□□□ -1.77
NID1P14543 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.97□□□□□ -1.77
NID1P14543 AC006064.5-201ENST00000541782 248 ntBASIC3.97□□□□□ -1.77
NID1P14543 AC113403.1-201ENST00000604910 193 ntBASIC3.97□□□□□ -1.77
NID1P14543 ZYXP1-201ENST00000617638 118 ntBASIC3.97□□□□□ -1.77
NID1P14543 AC022336.2-201ENST00000568966 2538 ntBASIC3.97□□□□□ -1.77
NID1P14543 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
NID1P14543 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.77
NID1P14543 AC002543.1-201ENST00000299783 1954 ntBASIC3.96□□□□□ -1.77
NID1P14543 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
NID1P14543 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.96□□□□□ -1.78
NID1P14543 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.96□□□□□ -1.78
NID1P14543 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NID1P14543 MIR331-201ENST00000362302 94 ntBASIC3.96□□□□□ -1.78
NID1P14543 RN7SKP280-201ENST00000364196 304 ntBASIC3.96□□□□□ -1.78
NID1P14543 SNORD87-201ENST00000364849 89 ntBASIC3.96□□□□□ -1.78
NID1P14543 U8.7-201ENST00000364940 136 ntBASIC3.96□□□□□ -1.78
NID1P14543 RNU1-64P-201ENST00000365443 163 ntBASIC3.96□□□□□ -1.78
NID1P14543 RNU6-1279P-201ENST00000383917 103 ntBASIC3.96□□□□□ -1.78
NID1P14543 RNU6-622P-201ENST00000384272 103 ntBASIC3.96□□□□□ -1.78
NID1P14543 MIR124-3-201ENST00000384866 87 ntBASIC3.96□□□□□ -1.78
NID1P14543 MIR548A3-201ENST00000385297 97 ntBASIC3.96□□□□□ -1.78
NID1P14543 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NID1P14543 SNORA79-201ENST00000408376 140 ntBASIC3.96□□□□□ -1.78
NID1P14543 TOMM22P2-201ENST00000430735 237 ntBASIC3.96□□□□□ -1.78
NID1P14543 AC245047.4-201ENST00000433189 144 ntBASIC3.96□□□□□ -1.78
NID1P14543 AL158147.1-201ENST00000443970 75 ntBASIC3.96□□□□□ -1.78
NID1P14543 RPL31P61-201ENST00000496160 376 ntBASIC3.96□□□□□ -1.78
NID1P14543 RNA5SP154-201ENST00000516193 111 ntBASIC3.96□□□□□ -1.78
NID1P14543 RNU6-581P-201ENST00000516214 105 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms