Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORA29-201ENST00000384183 140 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 SNORD51-201ENST00000384320 80 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 RNU6-750P-201ENST00000390946 107 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 AL353777.1-201ENST00000425552 326 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 MTCO2P12-201ENST00000427426 682 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL6A3P12111 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.05□□□□□ -2.42
COL6A3P12111 AC069257.2-201ENST00000441819 155 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 RPS29P15-201ENST00000458329 171 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 MEMO1P3-201ENST00000459811 302 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 HSPA8P13-201ENST00000523715 472 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AP002453.2-201ENST00000533503 320 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AC022616.8-201ENST00000533569 253 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AC002400.1-201ENST00000569310 726 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 MIR6828-201ENST00000636181 60 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
COL6A3P12111 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.05□□□□□ -2.42
COL6A3P12111 AC092447.10-201ENST00000620607 1652 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 SNORD114-24-201ENST00000365029 72 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 MIR196A2-201ENST00000385189 110 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 MIR140-201ENST00000385282 100 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 RAC1P6-201ENST00000423911 575 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 MTCO1P20-201ENST00000425366 358 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 PTGES3P1-201ENST00000439531 483 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AC098831.1-201ENST00000440661 216 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL6A3P12111 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 AC116347.2-201ENST00000514912 523 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL6A3P12111 SNORA77B-201ENST00000578179 125 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 AC024581.2-201ENST00000619986 252 ntBASIC-0.05□□□□□ -2.42
COL6A3P12111 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AL355796.1-201ENST00000406706 323 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AL161935.2-201ENST00000414627 60 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL6A3P12111 RAB11AP1-201ENST00000442978 646 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 SCARNA18-201ENST00000459004 134 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC113398.2-201ENST00000507630 558 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 RN7SKP19-201ENST00000516016 252 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 RNU6-980P-201ENST00000516925 103 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC105029.1-201ENST00000520250 669 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AL022067.1-201ENST00000602426 454 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC009318.4-201ENST00000620496 486 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AL590396.4-201ENST00000636779 956 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 MIR135A2-201ENST00000384854 100 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 RNU2-15P-201ENST00000410692 191 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC138623.1-201ENST00000418060 216 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC244098.3-201ENST00000424803 96 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC073261.1-201ENST00000429409 121 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AL096829.2-201ENST00000446582 742 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL6A3P12111 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL6A3P12111 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC023158.1-201ENST00000561632 1025 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 RNA5SP275-201ENST00000363936 118 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 RNU6-950P-201ENST00000384651 107 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL6A3P12111 RNU2-48P-201ENST00000410694 191 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AL590383.1-201ENST00000428602 75 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL6A3P12111 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL6A3P12111 ROCK1P1-201ENST00000573767 549 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC022432.1-201ENST00000595739 310 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AP003465.2-201ENST00000602571 373 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 AC091152.3-201ENST00000604227 325 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 SUMO2P14-201ENST00000604488 293 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 MTND2P41-201ENST00000637599 773 ntBASIC-0.06□□□□□ -2.42
COL6A3P12111 RNU6-23P-201ENST00000363283 107 ntBASIC-0.07□□□□□ -2.42
COL6A3P12111 MTND4P20-201ENST00000424125 869 ntBASIC-0.07□□□□□ -2.42
COL6A3P12111 BRK1P2-201ENST00000442875 223 ntBASIC-0.07□□□□□ -2.42
COL6A3P12111 AC098869.1-201ENST00000481627 292 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms