Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FABP5P15-201ENST00000453566 214 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXC4P09017 MTND1P11-201ENST00000456661 876 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 RNU6-329P-201ENST00000459618 107 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC007547.1-201ENST00000462177 490 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 DYNLL1P5-201ENST00000467158 270 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC087884.1-201ENST00000469738 328 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXC4P09017 RPL7P43-201ENST00000478876 753 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC103851.1-201ENST00000506833 274 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXC4P09017 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXC4P09017 RNU2-69P-201ENST00000516061 100 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXC4P09017 AC093027.1-201ENST00000546698 429 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC006199.1-201ENST00000548728 219 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 OR11H5P-201ENST00000554039 926 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 MIR4742-201ENST00000581069 85 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXC4P09017 AC005261.5-201ENST00000596280 355 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC073539.2-201ENST00000597113 165 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC092747.3-201ENST00000603769 301 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AL670379.10-201ENST00000604330 253 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AL670379.9-201ENST00000605428 253 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC069294.1-201ENST00000608397 350 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 Z82243.1-201ENST00000609432 473 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AL121757.2-201ENST00000611223 313 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 uc_338.11-201ENST00000619132 160 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AL359697.1-201ENST00000624879 587 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC241585.2-209ENST00000638217 143 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HOXC4P09017 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXC4P09017 SNORA75B-201ENST00000384053 137 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 MIR218-1-201ENST00000384999 110 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HOXC4P09017 RNA5SP219-201ENST00000390940 113 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 POLHP1-201ENST00000411806 470 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 MTND3P8-201ENST00000412909 339 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXC4P09017 CYCSP48-201ENST00000417124 323 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 HMGB1P27-201ENST00000431429 603 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AL161651.1-201ENST00000440882 223 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 GPM6BP3-201ENST00000442797 145 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AC007677.1-201ENST00000445757 515 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AL360271.2-201ENST00000447710 161 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 RNU6-953P-201ENST00000459154 107 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AC091885.1-201ENST00000506658 268 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXC4P09017 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXC4P09017 MIR892C-201ENST00000516410 77 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 RNU6-1088P-201ENST00000516850 104 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXC4P09017 DEFB122-202ENST00000569013 197 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.94□□□□□ -2.1
HOXC4P09017 AC105245.1-201ENST00000581934 244 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 MIR4765-201ENST00000585007 77 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.94□□□□□ -2.1
HOXC4P09017 VN1R80P-201ENST00000597126 338 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AC012640.5-201ENST00000623897 319 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HOXC4P09017 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HOXC4P09017 MTND4P29-201ENST00000503122 1372 ntBASIC1.94□□□□□ -2.1
HOXC4P09017 AC073544.1-201ENST00000600110 1595 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 AL359854.1-201ENST00000614203 1594 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXC4P09017 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RNU6-486P-201ENST00000363116 107 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RNU4-73P-201ENST00000363164 141 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 Y_RNA.166-201ENST00000363730 102 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 Y_RNA.301-201ENST00000364990 103 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RNU6-393P-201ENST00000384475 107 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 Y_RNA.509-201ENST00000384506 99 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 U6atac.2-201ENST00000408644 118 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RPL21P90-201ENST00000415692 466 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXC4P09017 AC093019.1-201ENST00000443135 252 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXC4P09017 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXC4P09017 MTND4P17-201ENST00000470444 350 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 AC117503.1-201ENST00000472241 394 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 AC139453.3-201ENST00000493276 369 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 Y_RNA.654-201ENST00000497848 106 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 MTND3P25-201ENST00000509243 135 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RNA5SP112-201ENST00000515937 99 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RNU6-273P-201ENST00000516937 96 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 RNU6-703P-201ENST00000516946 107 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC4P09017 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXC4P09017 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC4P09017 CYCSP26-201ENST00000534107 320 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 AC090115.3-201ENST00000553218 849 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC4P09017 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.93□□□□□ -2.1
HOXC4P09017 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.93□□□□□ -2.1
HOXC4P09017 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
HOXC4P09017 MIR4795-201ENST00000584182 89 ntBASIC1.93□□□□□ -2.1
HOXC4P09017 AC009314.1-201ENST00000603871 304 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms