Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.55□□□□□ -2
RB1P06400 AC008628.2-201ENST00000502605 298 ntBASIC2.55□□□□□ -2
RB1P06400 AP003033.1-201ENST00000527244 415 ntBASIC2.55□□□□□ -2
RB1P06400 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
RB1P06400 AC093249.1-201ENST00000567049 203 ntBASIC2.55□□□□□ -2
RB1P06400 AC009314.1-201ENST00000603871 304 ntBASIC2.55□□□□□ -2
RB1P06400 AL138963.2-201ENST00000605137 226 ntBASIC2.55□□□□□ -2
RB1P06400 CTHRC1P1-201ENST00000605383 469 ntBASIC2.55□□□□□ -2
RB1P06400 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.55□□□□□ -2
RB1P06400 AC092794.1-201ENST00000612734 582 ntBASIC2.55□□□□□ -2
RB1P06400 U6atac.1-201ENST00000616025 117 ntBASIC2.55□□□□□ -2
RB1P06400 MIR5739-201ENST00000619803 80 ntBASIC2.55□□□□□ -2
RB1P06400 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.55□□□□□ -2
RB1P06400 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
RB1P06400 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RB1P06400 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.54□□□□□ -2
RB1P06400 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RB1P06400 Y_RNA.157-201ENST00000363638 102 ntBASIC2.54□□□□□ -2
RB1P06400 RNU6-1329P-201ENST00000365664 107 ntBASIC2.54□□□□□ -2
RB1P06400 MIR450B-201ENST00000401182 78 ntBASIC2.54□□□□□ -2
RB1P06400 AIMP1P2-201ENST00000425294 312 ntBASIC2.54□□□□□ -2
RB1P06400 SNAP23P1-201ENST00000433229 246 ntBASIC2.54□□□□□ -2
RB1P06400 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.54□□□□□ -2
RB1P06400 HMGB1P18-201ENST00000438801 619 ntBASIC2.54□□□□□ -2
RB1P06400 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
RB1P06400 RNU7-66P-201ENST00000459469 62 ntBASIC2.54□□□□□ -2
RB1P06400 AC007547.1-201ENST00000462177 490 ntBASIC2.54□□□□□ -2
RB1P06400 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.54□□□□□ -2
RB1P06400 AC104576.1-201ENST00000524225 88 ntBASIC2.54□□□□□ -2
RB1P06400 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.54□□□□□ -2
RB1P06400 ELOCP5-201ENST00000604924 333 ntBASIC2.54□□□□□ -2
RB1P06400 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
RB1P06400 MTND5P6-201ENST00000422338 1798 ntBASIC2.54□□□□□ -2
RB1P06400 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RB1P06400 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RB1P06400 RNU6-254P-201ENST00000363377 107 ntBASIC2.53□□□□□ -2
RB1P06400 SNORD113-7-201ENST00000363762 77 ntBASIC2.53□□□□□ -2
RB1P06400 RNU6-214P-201ENST00000384130 107 ntBASIC2.53□□□□□ -2
RB1P06400 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
RB1P06400 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
RB1P06400 USP9YP8-201ENST00000441913 500 ntBASIC2.53□□□□□ -2
RB1P06400 FGF7P6-202ENST00000451282 293 ntBASIC2.53□□□□□ -2
RB1P06400 AL139109.1-201ENST00000455491 297 ntBASIC2.53□□□□□ -2
RB1P06400 CYP2C59P-201ENST00000457790 269 ntBASIC2.53□□□□□ -2
RB1P06400 TRBVA-201ENST00000498804 316 ntBASIC2.53□□□□□ -2
RB1P06400 FAM206BP-201ENST00000510179 541 ntBASIC2.53□□□□□ -2
RB1P06400 AF213884.2-201ENST00000510417 903 ntBASIC2.53□□□□□ -2
RB1P06400 MTND4LP26-201ENST00000518144 282 ntBASIC2.53□□□□□ -2
RB1P06400 AC115990.1-201ENST00000526957 301 ntBASIC2.53□□□□□ -2
RB1P06400 SNORA59B-202ENST00000578183 701 ntBASIC2.53□□□□□ -2
RB1P06400 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
RB1P06400 AP000907.4-201ENST00000604143 237 ntBASIC2.53□□□□□ -2
RB1P06400 AC064836.2-201ENST00000609491 462 ntBASIC2.53□□□□□ -2
RB1P06400 AC090617.10-201ENST00000624308 134 ntBASIC2.53□□□□□ -2
RB1P06400 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
RB1P06400 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
RB1P06400 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RB1P06400 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RB1P06400 U3.13-201ENST00000364804 214 ntBASIC2.52□□□□□ -2.01
RB1P06400 RNA5SP240-201ENST00000365355 128 ntBASIC2.52□□□□□ -2.01
RB1P06400 RNU6-43P-201ENST00000384302 107 ntBASIC2.52□□□□□ -2.01
RB1P06400 SNORA41-201ENST00000384675 132 ntBASIC2.52□□□□□ -2.01
RB1P06400 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RB1P06400 CBX3P9-201ENST00000402326 552 ntBASIC2.52□□□□□ -2.01
RB1P06400 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.52□□□□□ -2.01
RB1P06400 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.52□□□□□ -2.01
RB1P06400 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
RB1P06400 RNU6-1037P-201ENST00000459571 107 ntBASIC2.52□□□□□ -2.01
RB1P06400 RPL30P1-201ENST00000488676 339 ntBASIC2.52□□□□□ -2.01
RB1P06400 CKS1BP2-201ENST00000497342 240 ntBASIC2.52□□□□□ -2.01
RB1P06400 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.52□□□□□ -2.01
RB1P06400 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.52□□□□□ -2.01
RB1P06400 RNU6-1332P-201ENST00000516666 104 ntBASIC2.52□□□□□ -2.01
RB1P06400 RNU6-548P-201ENST00000517083 115 ntBASIC2.52□□□□□ -2.01
RB1P06400 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.52□□□□□ -2.01
RB1P06400 CBX3P7-201ENST00000532876 502 ntBASIC2.52□□□□□ -2.01
RB1P06400 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.52□□□□□ -2.01
RB1P06400 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.52□□□□□ -2.01
RB1P06400 AC100830.2-201ENST00000581636 240 ntBASIC2.52□□□□□ -2.01
RB1P06400 AC002553.4-201ENST00000616896 331 ntBASIC2.52□□□□□ -2.01
RB1P06400 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
RB1P06400 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RB1P06400 RNU6-1285P-201ENST00000363480 105 ntBASIC2.51□□□□□ -2.01
RB1P06400 RNU6-1141P-201ENST00000364520 107 ntBASIC2.51□□□□□ -2.01
RB1P06400 RNU6-128P-201ENST00000383976 107 ntBASIC2.51□□□□□ -2.01
RB1P06400 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.51□□□□□ -2.01
RB1P06400 AC009161.1-201ENST00000417306 376 ntBASIC2.51□□□□□ -2.01
RB1P06400 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
RB1P06400 UBE2V1P4-201ENST00000425374 344 ntBASIC2.51□□□□□ -2.01
RB1P06400 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.51□□□□□ -2.01
RB1P06400 AL161788.1-201ENST00000441805 169 ntBASIC2.51□□□□□ -2.01
RB1P06400 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.51□□□□□ -2.01
RB1P06400 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.51□□□□□ -2.01
RB1P06400 IMMP1LP2-201ENST00000552954 492 ntBASIC2.51□□□□□ -2.01
RB1P06400 TRAV32-201ENST00000553993 340 ntBASIC2.51□□□□□ -2.01
RB1P06400 AP001836.1-201ENST00000604675 523 ntBASIC2.51□□□□□ -2.01
RB1P06400 AL670379.2-201ENST00000604983 252 ntBASIC2.51□□□□□ -2.01
RB1P06400 AL356157.2-201ENST00000605122 111 ntBASIC2.51□□□□□ -2.01
RB1P06400 AC008121.3-201ENST00000618726 433 ntBASIC2.51□□□□□ -2.01
RB1P06400 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms