Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
APOA1P02647 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
APOA1P02647 RNA5SP201-201ENST00000410316 124 ntBASIC0.96□□□□□ -2.26
APOA1P02647 AC007395.1-201ENST00000451333 677 ntBASIC0.96□□□□□ -2.26
APOA1P02647 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.96□□□□□ -2.26
APOA1P02647 AC016925.1-201ENST00000458303 298 ntBASIC0.96□□□□□ -2.26
APOA1P02647 SNORD116-28-201ENST00000516123 91 ntBASIC0.96□□□□□ -2.26
APOA1P02647 AP003181.2-201ENST00000528941 181 ntBASIC0.96□□□□□ -2.26
APOA1P02647 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.96□□□□□ -2.26
APOA1P02647 MIR3923-201ENST00000579521 83 ntBASIC0.96□□□□□ -2.26
APOA1P02647 AL022345.2-201ENST00000606307 135 ntBASIC0.96□□□□□ -2.26
APOA1P02647 MIR6798-201ENST00000612887 67 ntBASIC0.96□□□□□ -2.26
APOA1P02647 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.96□□□□□ -2.26
APOA1P02647 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
APOA1P02647 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
APOA1P02647 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-37P-201ENST00000362692 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-11P-201ENST00000364234 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-25P-201ENST00000383873 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-1-201ENST00000383898 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-48P-201ENST00000384161 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-36P-201ENST00000384172 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-4P-201ENST00000384205 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-5P-201ENST00000384238 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-3P-201ENST00000384314 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-16P-201ENST00000384385 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-1026P-201ENST00000384465 108 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-15P-201ENST00000384534 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-2-201ENST00000384627 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-29P-201ENST00000384637 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-9-201ENST00000384776 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-33P-201ENST00000384793 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
APOA1P02647 MRPL42P2-201ENST00000403169 426 ntBASIC0.95□□□□□ -2.26
APOA1P02647 AC073910.1-201ENST00000445047 438 ntBASIC0.95□□□□□ -2.26
APOA1P02647 snoU109.3-201ENST00000459477 145 ntBASIC0.95□□□□□ -2.26
APOA1P02647 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
APOA1P02647 AC074344.1-201ENST00000512823 224 ntBASIC0.95□□□□□ -2.26
APOA1P02647 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.95□□□□□ -2.26
APOA1P02647 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
APOA1P02647 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.95□□□□□ -2.26
APOA1P02647 MIR3664-201ENST00000579074 99 ntBASIC0.95□□□□□ -2.26
APOA1P02647 AL391646.1-201ENST00000603860 190 ntBASIC0.95□□□□□ -2.26
APOA1P02647 RNU6-6P-201ENST00000606623 107 ntBASIC0.95□□□□□ -2.26
APOA1P02647 AC018645.2-201ENST00000609151 472 ntBASIC0.95□□□□□ -2.26
APOA1P02647 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
APOA1P02647 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
APOA1P02647 AL031667.3-201ENST00000620124 655 ntBASIC0.95□□□□□ -2.26
APOA1P02647 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
APOA1P02647 RNU4-91P-201ENST00000364778 135 ntBASIC0.94□□□□□ -2.26
APOA1P02647 SNORA70B-201ENST00000384210 135 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AL356776.1-201ENST00000406574 447 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.94□□□□□ -2.26
APOA1P02647 HIGD1AP15-201ENST00000416198 280 ntBASIC0.94□□□□□ -2.26
APOA1P02647 CYCSP49-201ENST00000420810 319 ntBASIC0.94□□□□□ -2.26
APOA1P02647 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.94□□□□□ -2.26
APOA1P02647 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AL163973.1-201ENST00000484753 577 ntBASIC0.94□□□□□ -2.26
APOA1P02647 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.94□□□□□ -2.26
APOA1P02647 RNU1-92P-201ENST00000517017 135 ntBASIC0.94□□□□□ -2.26
APOA1P02647 RNU6-685P-201ENST00000517088 95 ntBASIC0.94□□□□□ -2.26
APOA1P02647 CYCSP23-201ENST00000519781 313 ntBASIC0.94□□□□□ -2.26
APOA1P02647 HSPE1P4-201ENST00000550617 308 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.94□□□□□ -2.26
APOA1P02647 AC136932.1-201ENST00000574771 208 ntBASIC0.94□□□□□ -2.26
APOA1P02647 MIR4709-201ENST00000577272 72 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AC107304.1-201ENST00000604229 296 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AL359999.1-201ENST00000604513 294 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AL031775.1-201ENST00000607014 887 ntBASIC0.94□□□□□ -2.26
APOA1P02647 RNU4-5P-201ENST00000607255 135 ntBASIC0.94□□□□□ -2.26
APOA1P02647 PCGEM1.1-201ENST00000613431 131 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AC136475.10-201ENST00000620253 385 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AC068647.2-201ENST00000637380 353 ntBASIC0.94□□□□□ -2.26
APOA1P02647 AC006927.4-201ENST00000639187 543 ntBASIC0.94□□□□□ -2.26
APOA1P02647 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
APOA1P02647 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
APOA1P02647 RNU6-179P-201ENST00000363350 107 ntBASIC0.93□□□□□ -2.26
APOA1P02647 RNA5SP259-201ENST00000365541 109 ntBASIC0.93□□□□□ -2.26
APOA1P02647 RNU6-83P-201ENST00000384568 112 ntBASIC0.93□□□□□ -2.26
APOA1P02647 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
APOA1P02647 AL117342.1-201ENST00000404861 406 ntBASIC0.93□□□□□ -2.26
APOA1P02647 RNU6-387P-201ENST00000411331 105 ntBASIC0.93□□□□□ -2.26
APOA1P02647 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.93□□□□□ -2.26
APOA1P02647 GAPDHP17-201ENST00000449858 1001 ntBASIC0.93□□□□□ -2.26
APOA1P02647 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.93□□□□□ -2.26
APOA1P02647 AF131216.2-201ENST00000512316 564 ntBASIC0.93□□□□□ -2.26
APOA1P02647 BNIP3P16-201ENST00000589779 534 ntBASIC0.93□□□□□ -2.26
APOA1P02647 AC008147.4-201ENST00000617570 1204 ntBASIC0.93□□□□□ -2.26
APOA1P02647 AC241585.2-209ENST00000638217 143 ntBASIC0.93□□□□□ -2.26
APOA1P02647 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
APOA1P02647 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
APOA1P02647 Y_RNA.22-201ENST00000362492 102 ntBASIC0.92□□□□□ -2.26
APOA1P02647 RNU6-336P-201ENST00000364891 107 ntBASIC0.92□□□□□ -2.26
APOA1P02647 Y_RNA.324-201ENST00000365165 102 ntBASIC0.92□□□□□ -2.26
APOA1P02647 SNORA4.2-201ENST00000365313 147 ntBASIC0.92□□□□□ -2.26
APOA1P02647 RNU6-877P-201ENST00000383868 107 ntBASIC0.92□□□□□ -2.26
APOA1P02647 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.92□□□□□ -2.26
APOA1P02647 AC078809.1-201ENST00000427601 140 ntBASIC0.92□□□□□ -2.26
APOA1P02647 USP9YP14-201ENST00000430663 563 ntBASIC0.92□□□□□ -2.26
APOA1P02647 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms