Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.62□□□□□ -2.31
COL1A1P02452 AC114982.1-201ENST00000469402 321 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 RPL30P1-201ENST00000488676 339 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AC109445.1-201ENST00000512356 383 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 RNA5SP216-201ENST00000516111 123 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.62□□□□□ -2.31
COL1A1P02452 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.62□□□□□ -2.31
COL1A1P02452 AL157871.3-201ENST00000557231 293 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AC136618.2-201ENST00000575091 400 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 BNIP3P30-201ENST00000601184 574 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AC022893.3-201ENST00000607665 437 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 U6.42-201ENST00000618440 107 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AC126544.2-201ENST00000625174 749 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.62□□□□□ -2.31
COL1A1P02452 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
COL1A1P02452 RNU6-395P-201ENST00000365662 106 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 Y_RNA.597-201ENST00000410463 100 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.61□□□□□ -2.31
COL1A1P02452 AL365338.1-201ENST00000422282 858 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 TIMM9P1-201ENST00000436122 256 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC073614.1-201ENST00000438690 650 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AL606517.1-201ENST00000446914 387 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC007327.1-201ENST00000447461 264 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC132479.1-201ENST00000449160 144 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 snoU109.2-201ENST00000459316 135 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 snoU13.14-201ENST00000459372 104 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 RPL9P9-202ENST00000466501 579 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 HMGB1P30-201ENST00000492455 606 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 RNU6-914P-201ENST00000516749 109 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
COL1A1P02452 AC009712.1-201ENST00000564938 316 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC025678.1-201ENST00000567861 338 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.61□□□□□ -2.31
COL1A1P02452 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.61□□□□□ -2.31
COL1A1P02452 AC024060.1-201ENST00000607052 494 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC106800.4-201ENST00000614905 153 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.61□□□□□ -2.31
COL1A1P02452 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
COL1A1P02452 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.61□□□□□ -2.31
COL1A1P02452 SNORA63.3-201ENST00000362682 132 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 RNU5A-8P-201ENST00000364102 114 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
COL1A1P02452 RNU6-1065P-201ENST00000384513 106 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 VPS26BP1-201ENST00000417155 755 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
COL1A1P02452 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.61□□□□□ -2.31
COL1A1P02452 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.61□□□□□ -2.31
COL1A1P02452 USP9YP11-201ENST00000427537 717 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 HSPE1P13-201ENST00000451143 297 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.61□□□□□ -2.31
COL1A1P02452 AL353752.1-201ENST00000454946 260 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 ACA64.5-201ENST00000516207 127 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 SCARNA16.2-201ENST00000516520 172 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.61□□□□□ -2.31
COL1A1P02452 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.61□□□□□ -2.31
COL1A1P02452 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.61□□□□□ -2.31
COL1A1P02452 MIR3169-201ENST00000578032 83 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 VN1R82P-201ENST00000601481 356 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AL596327.1-201ENST00000603629 213 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 AC245297.2-201ENST00000610119 565 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 RNU6-1192P-201ENST00000612197 107 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 RNU6-489P-201ENST00000618289 107 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 MIR1248-201ENST00000629190 106 ntBASIC0.61□□□□□ -2.31
COL1A1P02452 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.61□□□□□ -2.31
COL1A1P02452 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
COL1A1P02452 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
COL1A1P02452 snoU2_19.1-201ENST00000362361 80 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 RNU6-621P-201ENST00000364752 109 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 SNORA25-201ENST00000384384 134 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 SNORD116-20-201ENST00000384529 92 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 FCF1P10-201ENST00000407590 479 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 Y_RNA.623-201ENST00000411128 95 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AL161935.2-201ENST00000414627 60 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 MTND2P9-201ENST00000422293 931 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 C8orf59P1-201ENST00000429930 303 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AL627311.1-201ENST00000431514 115 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.6□□□□□ -2.31
COL1A1P02452 Y_RNA.689-201ENST00000516589 107 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 RNU6-677P-201ENST00000516914 101 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.6□□□□□ -2.31
COL1A1P02452 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.6□□□□□ -2.31
COL1A1P02452 MTND4LP25-201ENST00000570218 163 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AC068620.3-201ENST00000602749 560 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 MIR15A-201ENST00000607334 83 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AC130324.3-201ENST00000614165 542 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AC063943.3-201ENST00000615562 356 ntBASIC0.6□□□□□ -2.31
COL1A1P02452 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.6□□□□□ -2.31
COL1A1P02452 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
COL1A1P02452 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.59□□□□□ -2.32
COL1A1P02452 HSBP1P2-201ENST00000299671 229 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 MIR412-201ENST00000362142 91 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 SNORD3E-201ENST00000362899 217 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 RNU6-960P-201ENST00000364056 120 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 SNORD114-6-201ENST00000364393 72 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.59□□□□□ -2.32
COL1A1P02452 Y_RNA.549-201ENST00000384657 102 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 MIR329-2-201ENST00000385029 84 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 BTF3L4P1-201ENST00000413813 468 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 ELOCP17-201ENST00000414751 326 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms