Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQB1P01920 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.36□□□□□ -2.19
HLA-DQB1P01920 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.36□□□□□ -2.19
HLA-DQB1P01920 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
HLA-DQB1P01920 AC084768.2-201ENST00000622736 221 ntBASIC1.36□□□□□ -2.19
HLA-DQB1P01920 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HLA-DQB1P01920 AC241585.2-209ENST00000638217 143 ntBASIC1.36□□□□□ -2.19
HLA-DQB1P01920 AP000648.3-201ENST00000623539 4507 ntBASIC1.36□□□□□ -2.19
HLA-DQB1P01920 RNU6-1141P-201ENST00000364520 107 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 MIR583-201ENST00000384846 75 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 MIR29C-201ENST00000385231 88 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 SNORA40.18-201ENST00000391200 128 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 SRIP3-201ENST00000413200 219 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC007098.1-201ENST00000420122 367 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 BX510359.4-201ENST00000423750 193 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AL357134.1-201ENST00000445848 426 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC098826.2-201ENST00000452011 651 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 SNRPFP3-201ENST00000457792 225 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC087884.1-201ENST00000469738 328 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC022447.4-201ENST00000504053 364 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC010424.1-201ENST00000506336 297 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 CCDC34P1-201ENST00000507441 517 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC108078.1-201ENST00000508073 725 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 Y_RNA.688-201ENST00000516565 95 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC115990.1-201ENST00000526957 301 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 CBX3P4-201ENST00000538909 354 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC090115.3-201ENST00000553218 849 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 MIR4255-201ENST00000579351 72 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 MIR4424-201ENST00000585257 86 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 RSL24D1P11-201ENST00000591045 491 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AL078605.1-201ENST00000603529 500 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC091805.2-201ENST00000603848 235 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 AC025811.1-201ENST00000604312 472 ntBASIC1.35□□□□□ -2.19
HLA-DQB1P01920 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB1P01920 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 U8.2-201ENST00000363156 134 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 RNU6-996P-201ENST00000365438 107 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 SNORD14D-201ENST00000384390 87 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 DEFB108C-201ENST00000400154 252 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC244636.1-201ENST00000421152 228 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 RPL23AP95-201ENST00000426806 265 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC010975.2-201ENST00000427781 588 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 HMGN2P3-201ENST00000433603 273 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 HMGN2P5-201ENST00000436882 273 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 TPT1P7-201ENST00000458300 517 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC093259.1-201ENST00000509755 300 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 MTND3P5-201ENST00000512798 333 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 SNORA31.16-201ENST00000516773 139 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC091544.4-201ENST00000555268 342 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC006362.1-201ENST00000567392 174 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AL034555.1-201ENST00000604816 211 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC008536.2-201ENST00000607284 349 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AC009318.2-201ENST00000610917 651 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AL450472.1-202ENST00000637286 180 ntBASIC1.34□□□□□ -2.19
HLA-DQB1P01920 AP000560.1-201ENST00000624150 1937 ntBASIC1.34□□□□□ -2.2
HLA-DQB1P01920 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
HLA-DQB1P01920 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.34□□□□□ -2.2
HLA-DQB1P01920 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.359-201ENST00000365498 102 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 RNU6-142P-201ENST00000384019 107 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 SNORA8-201ENST00000384574 139 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 SNORA26.3-201ENST00000391119 136 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 SNORA12-201ENST00000391162 147 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 RNU4-26P-201ENST00000410270 107 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AC078809.1-201ENST00000427601 140 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AC073464.1-201ENST00000429823 534 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 MTATP6P17-201ENST00000431030 672 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 VN1R108P-201ENST00000431580 830 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 MTCO2P16-201ENST00000436962 677 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQB1P01920 RPL32P28-201ENST00000443577 397 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 RNU7-63P-201ENST00000459054 62 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 UBE2DNL-203ENST00000474922 222 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 RPS29P21-201ENST00000496272 170 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 HMGB1P29-201ENST00000505659 499 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 RNU6-250P-201ENST00000516958 103 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms