Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC093259.1-201ENST00000509755 300 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC091874.1-201ENST00000511402 339 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC008549.1-201ENST00000512900 643 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 RNU6-991P-201ENST00000516168 107 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 MTND4P7-201ENST00000523876 130 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC115990.1-201ENST00000526957 301 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 MIR4287-201ENST00000579398 78 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC103987.3-201ENST00000582071 292 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 MIR3611-201ENST00000584484 83 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 MIR4424-201ENST00000585257 86 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC012507.3-201ENST00000603556 477 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 AC018889.1-201ENST00000605372 397 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.783-201ENST00000613546 102 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 uc_338.34-201ENST00000617467 174 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 SNORD98-201ENST00000636377 67 ntBASIC1.37□□□□□ -2.19
HLA-DQA1P01909 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
HLA-DQA1P01909 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RNU6-1141P-201ENST00000364520 107 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RNA5SP363-201ENST00000365072 115 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RNU6-1119P-201ENST00000384349 108 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 SNORD73A-201ENST00000386062 65 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 SNORA40.19-201ENST00000390846 128 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RNU11-3P-201ENST00000391111 133 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RNU4-55P-201ENST00000410731 137 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RN7SKP192-201ENST00000411291 327 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AL590135.1-201ENST00000422215 156 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC019205.3-201ENST00000424573 156 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 CBX3P6-201ENST00000430257 527 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 SNAP23P1-201ENST00000433229 246 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AL121601.2-201ENST00000438019 707 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC016700.2-201ENST00000446011 156 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC015911.1-201ENST00000495111 156 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RPL23AP94-201ENST00000512518 302 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 RNU6-1038P-201ENST00000516516 104 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AP005660.1-201ENST00000522972 293 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC090115.3-201ENST00000553218 849 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC091544.4-201ENST00000555268 342 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 MIR4513-201ENST00000581077 86 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC004223.2-201ENST00000590309 544 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AC087683.1-201ENST00000591187 441 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AL034555.1-201ENST00000604816 211 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 U2.17-201ENST00000611454 95 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AL773524.1-201ENST00000614065 229 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQA1P01909 AP006437.1-201ENST00000641440 3685 ntBASIC1.36□□□□□ -2.19
HLA-DQA1P01909 SNORD32B-201ENST00000364460 84 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 RNU6-142P-201ENST00000384019 107 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 SNORA67.3-201ENST00000384366 140 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 SNORD14D-201ENST00000384390 87 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 RNU6-997P-201ENST00000384725 107 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 MIR597-201ENST00000384968 97 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 RNA5SP219-201ENST00000390940 113 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL023284.1-201ENST00000403956 276 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL606923.1-201ENST00000406616 190 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 SRIP3-201ENST00000413200 219 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL590556.1-201ENST00000423231 483 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 USP9YP14-201ENST00000430663 563 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 VN1R108P-201ENST00000431580 830 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL353689.1-201ENST00000438895 199 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 RPL32P28-201ENST00000443577 397 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 MTCO2P18-201ENST00000457151 658 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 MTCO3P38-201ENST00000468910 766 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC022447.4-201ENST00000504053 364 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 RPL39P5-202ENST00000512505 151 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 MTND2P38-201ENST00000522536 667 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 HSPE1P4-201ENST00000550617 308 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 TRAV32-201ENST00000553993 340 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 MIR4299-201ENST00000577899 72 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC078899.2-201ENST00000595282 212 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL078605.1-201ENST00000603529 500 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC025754.2-201ENST00000606491 432 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms