Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.71□□□□□ -2.14
IFNB1P01574 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.71□□□□□ -2.14
IFNB1P01574 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.71□□□□□ -2.14
IFNB1P01574 AC016632.1-201ENST00000503994 196 ntBASIC1.71□□□□□ -2.14
IFNB1P01574 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.71□□□□□ -2.14
IFNB1P01574 AC105417.1-201ENST00000514691 285 ntBASIC1.71□□□□□ -2.14
IFNB1P01574 RNU6-567P-201ENST00000516746 107 ntBASIC1.71□□□□□ -2.14
IFNB1P01574 AC022880.1-201ENST00000534017 973 ntBASIC1.71□□□□□ -2.14
IFNB1P01574 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.71□□□□□ -2.14
IFNB1P01574 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
IFNB1P01574 AC068790.2-201ENST00000602601 557 ntBASIC1.71□□□□□ -2.14
IFNB1P01574 AC025754.2-201ENST00000606491 432 ntBASIC1.71□□□□□ -2.14
IFNB1P01574 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.71□□□□□ -2.14
IFNB1P01574 RNU6-428P-201ENST00000362942 107 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 SNORD114-6-201ENST00000364393 72 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 RNU6-456P-201ENST00000384493 107 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
IFNB1P01574 SNORA16.2-201ENST00000390991 127 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 SNORA12-201ENST00000391162 147 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 SNORA26.8-201ENST00000391306 124 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 MTND2P18-201ENST00000419962 1030 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.7□□□□□ -2.14
IFNB1P01574 RPL31P3-201ENST00000458430 332 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 UBL5P3-201ENST00000475112 231 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.7□□□□□ -2.14
IFNB1P01574 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.7□□□□□ -2.14
IFNB1P01574 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
IFNB1P01574 HSPE1P4-201ENST00000550617 308 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 AC110760.3-201ENST00000598794 467 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 AC107304.1-201ENST00000604229 296 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 Z94722.1-201ENST00000604328 474 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 AC072046.2-201ENST00000618366 268 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 MTND5P9-201ENST00000503854 1755 ntBASIC1.7□□□□□ -2.14
IFNB1P01574 RNU6-181P-201ENST00000363225 107 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 U3.9-201ENST00000363823 204 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.69□□□□□ -2.14
IFNB1P01574 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.69□□□□□ -2.14
IFNB1P01574 AC002486.1-201ENST00000435098 391 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.69□□□□□ -2.14
IFNB1P01574 AL356010.1-201ENST00000456364 102 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 SNORA59A-201ENST00000459326 152 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 AC025465.3-201ENST00000510570 311 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 RNU6-445P-201ENST00000516949 107 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.69□□□□□ -2.14
IFNB1P01574 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.69□□□□□ -2.14
IFNB1P01574 AK6P1-201ENST00000540219 478 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.69□□□□□ -2.14
IFNB1P01574 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
IFNB1P01574 MTND4P14-201ENST00000435799 1354 ntBASIC1.69□□□□□ -2.14
IFNB1P01574 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.69□□□□□ -2.14
IFNB1P01574 MIR424-201ENST00000362227 98 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 RNU6-266P-201ENST00000364225 107 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 RNU6-282P-201ENST00000365357 103 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 MTCO3P41-201ENST00000414801 328 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 MTCO3P46-201ENST00000425787 232 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 AL445567.1-201ENST00000439121 144 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 MTCO1P44-201ENST00000441935 243 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.68□□□□□ -2.14
IFNB1P01574 AC130509.1-201ENST00000464158 433 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 AC087477.1-201ENST00000465747 340 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 MIR449C-201ENST00000516047 92 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 SNORA31.16-201ENST00000516773 139 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 SNORD60.2-201ENST00000516883 86 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.68□□□□□ -2.14
IFNB1P01574 AC012507.3-201ENST00000603556 477 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 AC016925.2-201ENST00000605108 242 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 AC068944.2-201ENST00000610373 403 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 AL136221.1-201ENST00000621449 509 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
IFNB1P01574 MTND4P23-201ENST00000447723 1363 ntBASIC1.68□□□□□ -2.14
IFNB1P01574 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
IFNB1P01574 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
IFNB1P01574 RN7SKP101-201ENST00000411376 320 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 BX295541.1-201ENST00000417774 250 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 MTND2P9-201ENST00000422293 931 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.67□□□□□ -2.14
IFNB1P01574 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.67□□□□□ -2.14
IFNB1P01574 MTND4P32-201ENST00000437189 1237 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 SCARNA18-201ENST00000459004 134 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 SNRPGP7-201ENST00000469016 106 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.67□□□□□ -2.14
IFNB1P01574 AK3P2-201ENST00000507976 429 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.67□□□□□ -2.14
IFNB1P01574 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 AC060788.1-201ENST00000521318 469 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.67□□□□□ -2.14
IFNB1P01574 AL137161.1-201ENST00000532231 390 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 AC021231.3-201ENST00000558497 370 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.67□□□□□ -2.14
IFNB1P01574 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.67□□□□□ -2.14
IFNB1P01574 AC002044.1-201ENST00000606707 158 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 PCGEM1.1-201ENST00000613431 131 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 AC005520.5-201ENST00000613926 164 ntBASIC1.67□□□□□ -2.14
IFNB1P01574 AC022513.1-201ENST00000624512 117 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 662.3 ms