Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 AC092747.3-201ENST00000603769 301 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 Y_RNA.122-201ENST00000363331 96 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 RNU6-266P-201ENST00000364225 107 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 RNU4-20P-201ENST00000365601 151 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 MIR186-201ENST00000384988 86 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PDGFBP01127 AIMP1P2-201ENST00000425294 312 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.17□□□□□ -2.06
PDGFBP01127 MTND3P16-201ENST00000452205 344 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 RNU2-53P-201ENST00000516257 147 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 SNORA43.2-201ENST00000516652 128 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 RNU6-835P-201ENST00000516974 104 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.17□□□□□ -2.06
PDGFBP01127 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.17□□□□□ -2.06
PDGFBP01127 AC026271.5-201ENST00000577873 130 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 AC010525.2-201ENST00000590920 195 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 AC107304.1-201ENST00000604229 296 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 RNU6-85P-201ENST00000605989 107 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 AL121757.2-201ENST00000611223 313 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
PDGFBP01127 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
PDGFBP01127 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFBP01127 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDGFBP01127 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDGFBP01127 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.16□□□□□ -2.06
PDGFBP01127 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDGFBP01127 Y_RNA.116-201ENST00000363292 103 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 U3.13-201ENST00000364804 214 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 SNORA25.9-201ENST00000365087 128 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 SNORA25B-201ENST00000365507 128 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PDGFBP01127 RNA5SP390-201ENST00000410191 113 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.16□□□□□ -2.06
PDGFBP01127 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.16□□□□□ -2.06
PDGFBP01127 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.16□□□□□ -2.06
PDGFBP01127 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.16□□□□□ -2.06
PDGFBP01127 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.16□□□□□ -2.06
PDGFBP01127 AC107032.1-201ENST00000485945 480 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 AC083904.1-201ENST00000487828 231 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 RNA5SP402-201ENST00000517148 110 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 IMMP1LP2-201ENST00000552954 492 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 AC110588.1-201ENST00000559699 137 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 AL121917.1-203ENST00000605534 577 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 AC068137.3-201ENST00000639191 341 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 AC073869.6-201ENST00000640656 341 ntBASIC2.16□□□□□ -2.06
PDGFBP01127 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.16□□□□□ -2.06
PDGFBP01127 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
PDGFBP01127 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.06
PDGFBP01127 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU6-78P-201ENST00000362897 107 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU6-428P-201ENST00000362942 107 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU6-1252P-201ENST00000363054 104 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU6-38P-201ENST00000384085 107 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU6-622P-201ENST00000384272 103 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 SEPT14P3-201ENST00000439401 183 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 AL732372.2-207ENST00000445840 183 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
PDGFBP01127 SEPT14P2-201ENST00000453405 183 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU6-333P-201ENST00000459117 107 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 AC055731.1-201ENST00000474387 401 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 SEPT14P4-201ENST00000513445 186 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNU6-377P-201ENST00000515965 102 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 AC034114.1-201ENST00000520293 285 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 FO082796.1-201ENST00000523795 183 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 EIF1P4-201ENST00000572664 335 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 LRRC37A5P-203ENST00000580181 585 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 AL162413.1-201ENST00000603198 110 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 AL160394.1-201ENST00000624765 724 ntBASIC2.15□□□□□ -2.07
PDGFBP01127 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDGFBP01127 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDGFBP01127 OR4G1P-203ENST00000641984 1631 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 RNU6-655P-201ENST00000362858 107 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PDGFBP01127 RNU6-1032P-201ENST00000384100 107 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 Y_RNA.453-201ENST00000384223 109 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 MIR518E-201ENST00000385252 88 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 SNORD73A-201ENST00000386062 65 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 Y_RNA.615-201ENST00000410769 117 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC008267.5-201ENST00000424928 265 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AL591043.1-201ENST00000432461 424 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 GPM6BP3-201ENST00000442797 145 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 RNU7-167P-201ENST00000459160 62 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 SNORD13-201ENST00000459299 104 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFBP01127 TRMT112P2-201ENST00000512910 132 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFBP01127 RNU6-323P-201ENST00000521915 107 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.14□□□□□ -2.07
PDGFBP01127 AP000763.2-201ENST00000540641 163 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC103996.1-201ENST00000555468 102 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms