Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
ABCA1O95477 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA1O95477 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA1O95477 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA1O95477 ZNF971P-201ENST00000562068 1249 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AC015688.6-201ENST00000577737 104 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AL365204.3-201ENST00000612448 685 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.3□□□□□ -2.36
ABCA1O95477 PCMTD1P7-201ENST00000634506 357 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
ABCA1O95477 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
ABCA1O95477 MTCO1P21-201ENST00000416634 589 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.29□□□□□ -2.36
ABCA1O95477 RPS15AP10-201ENST00000432472 382 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC245047.7-201ENST00000440265 293 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC114878.1-201ENST00000441166 358 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.29□□□□□ -2.36
ABCA1O95477 AC003071.1-201ENST00000451219 789 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 OR2AQ1P-201ENST00000451972 200 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA1O95477 AC114981.1-201ENST00000503897 678 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA1O95477 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.29□□□□□ -2.36
ABCA1O95477 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.29□□□□□ -2.36
ABCA1O95477 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.29□□□□□ -2.36
ABCA1O95477 AC018659.1-201ENST00000551083 169 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 MIR4802-201ENST00000581881 80 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AL513534.2-201ENST00000603836 250 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 SNRPGP20-201ENST00000604477 205 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 MIR3976-201ENST00000606807 139 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA1O95477 AC018926.1-201ENST00000616335 435 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC104985.3-201ENST00000623479 597 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 CDR1-202ENST00000625883 1485 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 MIR329-1-201ENST00000385028 80 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC013262.1-201ENST00000426710 252 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.29□□□□□ -2.36
ABCA1O95477 TIMM9P1-201ENST00000436122 256 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.29□□□□□ -2.36
ABCA1O95477 MTCO1P27-201ENST00000448269 226 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 MTND4P21-201ENST00000453886 1357 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC136628.3-201ENST00000521868 290 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.29□□□□□ -2.36
ABCA1O95477 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.29□□□□□ -2.36
ABCA1O95477 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA1O95477 MIR4293-201ENST00000584305 78 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC021171.1-201ENST00000603137 706 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AL136363.2-201ENST00000604173 851 ntBASIC0.29□□□□□ -2.36
ABCA1O95477 AC092268.1-201ENST00000342691 405 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 RNU6-853P-201ENST00000364306 107 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 RNU6-487P-201ENST00000365430 104 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 RNU6-468P-201ENST00000384003 109 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 RNU6-883P-201ENST00000384597 107 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.28□□□□□ -2.36
ABCA1O95477 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.28□□□□□ -2.36
ABCA1O95477 AC109445.1-201ENST00000512356 383 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 MTCO2P2-201ENST00000591258 225 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 OR4H6P-202ENST00000603819 340 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 AL158163.2-201ENST00000619110 700 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 AC010615.1-201ENST00000594254 1764 ntBASIC0.28□□□□□ -2.36
ABCA1O95477 SNORD18A-201ENST00000363753 72 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 RNU6-744P-201ENST00000365557 107 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 RNU6-1316P-201ENST00000384242 108 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.27□□□□□ -2.37
ABCA1O95477 AL158050.1-201ENST00000416077 457 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.27□□□□□ -2.37
ABCA1O95477 COX6CP10-201ENST00000416832 224 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA1O95477 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.27□□□□□ -2.37
ABCA1O95477 AP003327.1-201ENST00000529684 127 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AL357075.2-201ENST00000614906 189 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
ABCA1O95477 AC245060.5-201ENST00000610778 3293 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 RNU6-296P-201ENST00000384608 107 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.27□□□□□ -2.37
ABCA1O95477 RNU2-62P-201ENST00000410868 191 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AC114482.1-201ENST00000418010 247 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 RNU6-758P-201ENST00000516292 89 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AC104417.1-201ENST00000523974 751 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AL121579.1-201ENST00000555129 305 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AC004817.2-201ENST00000561794 651 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AC137800.2-201ENST00000574375 120 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 MIR4667-201ENST00000578933 66 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AL391001.1-201ENST00000602747 715 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AL590229.1-201ENST00000603497 542 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA1O95477 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA1O95477 Pinc.1-201ENST00000616452 154 ntBASIC0.27□□□□□ -2.37
ABCA1O95477 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
ABCA1O95477 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.26□□□□□ -2.37
ABCA1O95477 RNU6-1237P-201ENST00000384777 107 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 AC010099.3-201ENST00000423896 409 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.26□□□□□ -2.37
ABCA1O95477 HMGB1P28-201ENST00000507778 552 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 RNA5SP216-201ENST00000516111 123 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 AC091489.2-201ENST00000566263 604 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 MIR3664-201ENST00000579074 99 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 AC007363.1-201ENST00000604736 620 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 AC100812.1-201ENST00000607622 580 ntBASIC0.26□□□□□ -2.37
ABCA1O95477 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms