Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNA5SP95-201ENST00000410319 137 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.22□□□□□ -2.44
USH2AO75445 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.22□□□□□ -2.44
USH2AO75445 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 MTCO3P43-201ENST00000440974 771 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.22□□□□□ -2.44
USH2AO75445 AC007151.1-201ENST00000572774 483 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 MIR3129-201ENST00000581095 76 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AC012065.4-201ENST00000602445 679 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AC069304.3-201ENST00000603938 1084 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AL590491.3-201ENST00000610731 82 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 MIR8076-201ENST00000611401 83 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 RNU2-59P-201ENST00000410482 191 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.22□□□□□ -2.44
USH2AO75445 MTND1P9-201ENST00000453775 944 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 RNA5SP503-201ENST00000517047 117 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.22□□□□□ -2.44
USH2AO75445 AC112220.3-201ENST00000605502 502 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AL357078.3-201ENST00000607528 618 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.22□□□□□ -2.44
USH2AO75445 7SK.10-201ENST00000621414 298 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AL109659.3-201ENST00000624985 950 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 SNORD114-25-201ENST00000363742 72 ntBASIC-0.22□□□□□ -2.45
USH2AO75445 RNU6-296P-201ENST00000384608 107 ntBASIC-0.22□□□□□ -2.45
USH2AO75445 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.22□□□□□ -2.45
USH2AO75445 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.22□□□□□ -2.45
USH2AO75445 BRK1P2-201ENST00000442875 223 ntBASIC-0.22□□□□□ -2.45
USH2AO75445 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.22□□□□□ -2.45
USH2AO75445 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.22□□□□□ -2.45
USH2AO75445 AC022861.1-201ENST00000522981 663 ntBASIC-0.22□□□□□ -2.45
USH2AO75445 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.22□□□□□ -2.45
USH2AO75445 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.22□□□□□ -2.45
USH2AO75445 AL139286.2-201ENST00000606838 396 ntBASIC-0.22□□□□□ -2.45
USH2AO75445 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC-0.22□□□□□ -2.45
USH2AO75445 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.22□□□□□ -2.45
USH2AO75445 RNU5E-1-201ENST00000362477 120 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RNA5SP86-201ENST00000390869 98 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RPS27P16-201ENST00000425758 201 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC-0.23□□□□□ -2.45
USH2AO75445 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC-0.23□□□□□ -2.45
USH2AO75445 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.23□□□□□ -2.45
USH2AO75445 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 uc_338.15-201ENST00000615470 191 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 SNORA26.3-201ENST00000391119 136 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 snoU13.28-201ENST00000459235 104 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 AC108157.1-201ENST00000510511 539 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RN7SKP5-201ENST00000517045 272 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RNU6-706P-201ENST00000517229 104 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC104408.1-201ENST00000605241 170 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC144521.1-201ENST00000607148 956 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AL360219.1-201ENST00000610230 366 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC009233.1-201ENST00000616477 371 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 MIR8063-201ENST00000621930 81 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
USH2AO75445 RNA5SP327-201ENST00000362494 101 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RNU6-414P-201ENST00000363705 104 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RPL22P22-201ENST00000395439 379 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 AC007435.1-201ENST00000421086 415 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 RPL31P53-201ENST00000457065 348 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RPF2P2-201ENST00000504693 896 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RNU6-759P-201ENST00000516740 103 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC090572.1-201ENST00000519251 160 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 AL121579.1-201ENST00000555129 305 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 MIR4432-201ENST00000581823 84 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 BNIP3P27-201ENST00000599991 412 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.23□□□□□ -2.45
USH2AO75445 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.23□□□□□ -2.45
USH2AO75445 AC040168.1-201ENST00000623594 991 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 SNORD115-42-201ENST00000364273 82 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AL449283.1-202ENST00000418249 604 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 MTND4P15-201ENST00000437913 1033 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 RPL30P15-201ENST00000457129 321 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 snoU13.4-201ENST00000458916 104 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.23□□□□□ -2.45
USH2AO75445 AC015688.6-201ENST00000577737 104 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 AL009028.1-201ENST00000604895 802 ntBASIC-0.23□□□□□ -2.45
USH2AO75445 BX322639.1-202ENST00000423987 2213 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 RNY3P11-201ENST00000364153 102 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
USH2AO75445 MIR1250-201ENST00000408098 113 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.24□□□□□ -2.45
USH2AO75445 AC069294.1-201ENST00000608397 350 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC009033.1-201ENST00000624279 431 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 OR5T3-201ENST00000303059 1023 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms