Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 Y_RNA.314-201ENST00000365114 102 ntBASIC2.67□□□□□ -1.98
LDB3O75112 RNU6-827P-201ENST00000365553 106 ntBASIC2.67□□□□□ -1.98
LDB3O75112 RNU6-898P-201ENST00000365627 104 ntBASIC2.67□□□□□ -1.98
LDB3O75112 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.67□□□□□ -1.98
LDB3O75112 RNU6-72P-201ENST00000384285 79 ntBASIC2.67□□□□□ -1.98
LDB3O75112 RNU6-790P-201ENST00000384479 105 ntBASIC2.67□□□□□ -1.98
LDB3O75112 MIR518D-201ENST00000385014 87 ntBASIC2.67□□□□□ -1.98
LDB3O75112 MIR181B1-201ENST00000385240 110 ntBASIC2.67□□□□□ -1.98
LDB3O75112 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.67□□□□□ -1.98
LDB3O75112 SNORD56-201ENST00000413522 71 ntBASIC2.67□□□□□ -1.98
LDB3O75112 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB3O75112 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LDB3O75112 AC009414.1-201ENST00000427200 443 ntBASIC2.67□□□□□ -1.98
LDB3O75112 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.67□□□□□ -1.98
LDB3O75112 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB3O75112 HMGN2P10-201ENST00000448085 265 ntBASIC2.67□□□□□ -1.98
LDB3O75112 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LDB3O75112 AC114801.2-201ENST00000503825 781 ntBASIC2.67□□□□□ -1.98
LDB3O75112 MRPS35P2-201ENST00000508242 191 ntBASIC2.67□□□□□ -1.98
LDB3O75112 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.67□□□□□ -1.98
LDB3O75112 AC103996.1-201ENST00000555468 102 ntBASIC2.67□□□□□ -1.98
LDB3O75112 AC008739.2-201ENST00000597006 317 ntBASIC2.67□□□□□ -1.98
LDB3O75112 AC024153.1-201ENST00000603103 365 ntBASIC2.67□□□□□ -1.98
LDB3O75112 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB3O75112 MIR1244-1-201ENST00000612829 85 ntBASIC2.67□□□□□ -1.98
LDB3O75112 AC090617.7-201ENST00000623952 126 ntBASIC2.67□□□□□ -1.98
LDB3O75112 MIR1244-3-201ENST00000635744 85 ntBASIC2.67□□□□□ -1.98
LDB3O75112 MIR4272-201ENST00000635924 64 ntBASIC2.67□□□□□ -1.98
LDB3O75112 MIR1244-2-201ENST00000636449 85 ntBASIC2.67□□□□□ -1.98
LDB3O75112 MIR1244-4-202ENST00000636813 85 ntBASIC2.67□□□□□ -1.98
LDB3O75112 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
LDB3O75112 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LDB3O75112 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LDB3O75112 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB3O75112 RPL9P7-201ENST00000330965 580 ntBASIC2.66□□□□□ -1.98
LDB3O75112 RNU6-428P-201ENST00000362942 107 ntBASIC2.66□□□□□ -1.98
LDB3O75112 Y_RNA.176-201ENST00000363815 109 ntBASIC2.66□□□□□ -1.98
LDB3O75112 RNU4-42P-201ENST00000364738 142 ntBASIC2.66□□□□□ -1.98
LDB3O75112 Y_RNA.396-201ENST00000383949 103 ntBASIC2.66□□□□□ -1.98
LDB3O75112 Y_RNA.401-201ENST00000383965 117 ntBASIC2.66□□□□□ -1.98
LDB3O75112 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
LDB3O75112 RNU6-1109P-201ENST00000391187 107 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AL451074.5-201ENST00000415894 435 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.66□□□□□ -1.98
LDB3O75112 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.66□□□□□ -1.98
LDB3O75112 AL135938.1-201ENST00000443141 297 ntBASIC2.66□□□□□ -1.98
LDB3O75112 OR2AQ1P-201ENST00000451972 200 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC006026.2-201ENST00000457376 180 ntBASIC2.66□□□□□ -1.98
LDB3O75112 RPL23AP45-201ENST00000476406 468 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC015911.1-201ENST00000495111 156 ntBASIC2.66□□□□□ -1.98
LDB3O75112 Y_RNA.687-201ENST00000516558 91 ntBASIC2.66□□□□□ -1.98
LDB3O75112 SCARNA13-201ENST00000516672 275 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC109479.2-201ENST00000517842 174 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC131281.1-201ENST00000522984 164 ntBASIC2.66□□□□□ -1.98
LDB3O75112 GNAI2P1-201ENST00000541815 315 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AL161670.1-201ENST00000554348 137 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC021739.1-201ENST00000559631 174 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC025281.1-201ENST00000567026 265 ntBASIC2.66□□□□□ -1.98
LDB3O75112 MIR5188-201ENST00000583467 113 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC107871.2-201ENST00000612894 502 ntBASIC2.66□□□□□ -1.98
LDB3O75112 MIR3199-2-201ENST00000636243 86 ntBASIC2.66□□□□□ -1.98
LDB3O75112 AC096644.4-201ENST00000563417 2912 ntBASIC2.66□□□□□ -1.98
LDB3O75112 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LDB3O75112 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.98
LDB3O75112 AC108206.1-201ENST00000570186 4159 ntBASIC2.65□□□□□ -1.98
LDB3O75112 AL365361.1-201ENST00000566942 3481 ntBASIC2.65□□□□□ -1.98
LDB3O75112 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.65□□□□□ -1.98
LDB3O75112 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
LDB3O75112 Y_RNA.210-201ENST00000364161 110 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RNU6-702P-201ENST00000364982 107 ntBASIC2.65□□□□□ -1.99
LDB3O75112 SNORA51.4-201ENST00000364993 124 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RNU6-806P-201ENST00000365147 105 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RNU5E-7P-201ENST00000365290 117 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RNU6-596P-201ENST00000365395 98 ntBASIC2.65□□□□□ -1.99
LDB3O75112 U8.8-201ENST00000365399 135 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AL513475.1-201ENST00000406602 315 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RNU6-1156P-201ENST00000410365 100 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AL117339.3-201ENST00000418733 162 ntBASIC2.65□□□□□ -1.99
LDB3O75112 NUP35P1-201ENST00000422734 947 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RPS15AP10-201ENST00000432472 382 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RPS15AP5-201ENST00000436276 388 ntBASIC2.65□□□□□ -1.99
LDB3O75112 PCNPP5-201ENST00000452246 481 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RNU7-169P-201ENST00000459456 61 ntBASIC2.65□□□□□ -1.99
LDB3O75112 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.65□□□□□ -1.99
LDB3O75112 RPL17P19-201ENST00000489069 552 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RPL22P13-201ENST00000493291 347 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RNU6-264P-201ENST00000517134 104 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AP004607.1-201ENST00000524456 203 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AP000889.1-201ENST00000530968 660 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.65□□□□□ -1.99
LDB3O75112 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.65□□□□□ -1.99
LDB3O75112 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.65□□□□□ -1.99
LDB3O75112 AC005899.2-201ENST00000584353 90 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AC020895.1-201ENST00000595362 272 ntBASIC2.65□□□□□ -1.99
LDB3O75112 RPL23AP78-201ENST00000599928 470 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AC009314.1-201ENST00000603871 304 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AC090115.4-201ENST00000609970 188 ntBASIC2.65□□□□□ -1.99
LDB3O75112 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.65□□□□□ -1.99
LDB3O75112 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.65□□□□□ -1.99
LDB3O75112 AC006386.2-201ENST00000624491 75 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms