Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP20O60882 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP20O60882 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
MMP20O60882 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP20O60882 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP20O60882 SNORA1.3-201ENST00000384676 136 ntBASIC4.08□□□□□ -1.76
MMP20O60882 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP20O60882 HLA-N-201ENST00000437516 135 ntBASIC4.08□□□□□ -1.76
MMP20O60882 AL161651.1-201ENST00000440882 223 ntBASIC4.08□□□□□ -1.76
MMP20O60882 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP20O60882 RNU5F-2P-201ENST00000516066 82 ntBASIC4.08□□□□□ -1.76
MMP20O60882 AC136628.3-201ENST00000521868 290 ntBASIC4.08□□□□□ -1.76
MMP20O60882 AC100821.1-201ENST00000523153 2479 ntBASIC4.08□□□□□ -1.76
MMP20O60882 IGKV2D-19-201ENST00000523346 262 ntBASIC4.08□□□□□ -1.76
MMP20O60882 MIR4431-201ENST00000579990 94 ntBASIC4.08□□□□□ -1.76
MMP20O60882 MIR5684-201ENST00000585074 65 ntBASIC4.08□□□□□ -1.76
MMP20O60882 AC025946.2-201ENST00000603398 234 ntBASIC4.08□□□□□ -1.76
MMP20O60882 AL110115.1-201ENST00000614396 364 ntBASIC4.08□□□□□ -1.76
MMP20O60882 AC004825.2-201ENST00000616634 455 ntBASIC4.08□□□□□ -1.76
MMP20O60882 AC011266.1-201ENST00000624119 3569 ntBASIC4.08□□□□□ -1.76
MMP20O60882 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP20O60882 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP20O60882 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP20O60882 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP20O60882 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
MMP20O60882 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP20O60882 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP20O60882 SNORD35B-201ENST00000363660 87 ntBASIC4.07□□□□□ -1.76
MMP20O60882 RNU6-103P-201ENST00000363686 107 ntBASIC4.07□□□□□ -1.76
MMP20O60882 RNU6-801P-201ENST00000364087 105 ntBASIC4.07□□□□□ -1.76
MMP20O60882 RNU6-454P-201ENST00000364292 107 ntBASIC4.07□□□□□ -1.76
MMP20O60882 RNU6-818P-201ENST00000364837 108 ntBASIC4.07□□□□□ -1.76
MMP20O60882 Y_RNA.415-201ENST00000384012 112 ntBASIC4.07□□□□□ -1.76
MMP20O60882 CRYBB2P1-203ENST00000415709 538 ntBASIC4.07□□□□□ -1.76
MMP20O60882 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.07□□□□□ -1.76
MMP20O60882 RPL29P14-201ENST00000495837 428 ntBASIC4.07□□□□□ -1.76
MMP20O60882 RNU6-107P-201ENST00000516643 102 ntBASIC4.07□□□□□ -1.76
MMP20O60882 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP20O60882 AC025627.2-201ENST00000576220 160 ntBASIC4.07□□□□□ -1.76
MMP20O60882 MIR4286-201ENST00000580651 93 ntBASIC4.07□□□□□ -1.76
MMP20O60882 MIR4744-201ENST00000581563 82 ntBASIC4.07□□□□□ -1.76
MMP20O60882 CUL1P1-201ENST00000509510 2425 ntBASIC4.07□□□□□ -1.76
MMP20O60882 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP20O60882 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP20O60882 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
MMP20O60882 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP20O60882 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.07□□□□□ -1.76
MMP20O60882 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP20O60882 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP20O60882 AC010332.2-201ENST00000613083 1904 ntBASIC4.07□□□□□ -1.76
MMP20O60882 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MMP20O60882 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP20O60882 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP20O60882 SNORA40-201ENST00000388090 126 ntBASIC4.06□□□□□ -1.76
MMP20O60882 RPL23AP48-201ENST00000406913 488 ntBASIC4.06□□□□□ -1.76
MMP20O60882 TBCAP1-201ENST00000436520 327 ntBASIC4.06□□□□□ -1.76
MMP20O60882 AC107626.1-201ENST00000471084 183 ntBASIC4.06□□□□□ -1.76
MMP20O60882 AC006445.2-201ENST00000510061 472 ntBASIC4.06□□□□□ -1.76
MMP20O60882 RNU7-143P-201ENST00000516781 65 ntBASIC4.06□□□□□ -1.76
MMP20O60882 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.06□□□□□ -1.76
MMP20O60882 AC021269.2-201ENST00000532318 330 ntBASIC4.06□□□□□ -1.76
MMP20O60882 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP20O60882 AC011471.1-201ENST00000585766 187 ntBASIC4.06□□□□□ -1.76
MMP20O60882 AL606490.9-201ENST00000603331 271 ntBASIC4.06□□□□□ -1.76
MMP20O60882 AL034555.1-201ENST00000604816 211 ntBASIC4.06□□□□□ -1.76
MMP20O60882 MIR6868-201ENST00000611215 58 ntBASIC4.06□□□□□ -1.76
MMP20O60882 AC013791.1-201ENST00000616619 62 ntBASIC4.06□□□□□ -1.76
MMP20O60882 MIR7702-201ENST00000621931 59 ntBASIC4.06□□□□□ -1.76
MMP20O60882 MIR6500-201ENST00000622700 86 ntBASIC4.06□□□□□ -1.76
MMP20O60882 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP20O60882 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP20O60882 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP20O60882 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP20O60882 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MMP20O60882 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.05□□□□□ -1.76
MMP20O60882 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP20O60882 AC016588.2-201ENST00000632484 3021 ntBASIC4.05□□□□□ -1.76
MMP20O60882 SNORA60-201ENST00000362396 134 ntBASIC4.05□□□□□ -1.76
MMP20O60882 RNA5SP388-201ENST00000362584 119 ntBASIC4.05□□□□□ -1.76
MMP20O60882 RNA5SP502-201ENST00000362694 119 ntBASIC4.05□□□□□ -1.76
MMP20O60882 SNORD74.4-201ENST00000364129 80 ntBASIC4.05□□□□□ -1.76
MMP20O60882 RNU6-578P-201ENST00000390980 103 ntBASIC4.05□□□□□ -1.76
MMP20O60882 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
MMP20O60882 AL691449.1-201ENST00000426570 421 ntBASIC4.05□□□□□ -1.76
MMP20O60882 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
MMP20O60882 RNU6-344P-201ENST00000516635 111 ntBASIC4.05□□□□□ -1.76
MMP20O60882 IFITM8P-201ENST00000522529 394 ntBASIC4.05□□□□□ -1.76
MMP20O60882 AC027176.1-201ENST00000560204 514 ntBASIC4.05□□□□□ -1.76
MMP20O60882 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MMP20O60882 MIR432-201ENST00000606207 94 ntBASIC4.05□□□□□ -1.76
MMP20O60882 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MMP20O60882 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
MMP20O60882 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP20O60882 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MMP20O60882 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
MMP20O60882 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
MMP20O60882 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
MMP20O60882 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.04□□□□□ -1.76
MMP20O60882 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.04□□□□□ -1.76
MMP20O60882 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms