Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SSNA1O43805 AC010975.2-201ENST00000427781 588 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 MTND1P18-201ENST00000448191 573 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 AC007395.1-201ENST00000451333 677 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.73□□□□□ -2.29
SSNA1O43805 TRBV12-1-201ENST00000479785 344 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.73□□□□□ -2.29
SSNA1O43805 RNU5F-4P-201ENST00000516581 114 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 MIR4303-201ENST00000581299 66 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 AC008147.4-201ENST00000617570 1204 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.73□□□□□ -2.29
SSNA1O43805 AL138960.2-201ENST00000625145 535 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 AC013437.2-201ENST00000639587 677 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SSNA1O43805 RNU4-1-201ENST00000363925 141 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 RNU6-1141P-201ENST00000364520 107 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 Y_RNA.302-201ENST00000364997 102 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 Y_RNA.510-201ENST00000384511 114 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 RNU6-293P-201ENST00000411259 106 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 HIGD1AP15-201ENST00000416198 280 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 SNRPEP10-201ENST00000420249 274 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 PIGFP2-201ENST00000421400 651 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.72□□□□□ -2.29
SSNA1O43805 AC007283.2-201ENST00000424739 197 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.72□□□□□ -2.29
SSNA1O43805 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.72□□□□□ -2.29
SSNA1O43805 RN7SKP210-201ENST00000459176 261 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 UBE2DNL-203ENST00000474922 222 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 AL163973.1-201ENST00000484753 577 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 AC116337.1-201ENST00000509680 687 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.72□□□□□ -2.29
SSNA1O43805 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.72□□□□□ -2.29
SSNA1O43805 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
SSNA1O43805 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SSNA1O43805 MTND4P14-201ENST00000435799 1354 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.71□□□□□ -2.3
SSNA1O43805 U3.9-201ENST00000363823 204 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 RNU4-68P-201ENST00000364314 141 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 MIR19B1-201ENST00000384829 87 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 RN7SKP61-201ENST00000410642 295 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 RNU6-607P-201ENST00000411283 108 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.71□□□□□ -2.3
SSNA1O43805 RNU7-34P-201ENST00000459394 64 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 RNU6-856P-201ENST00000516959 98 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 SNORA70.22-201ENST00000517160 124 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 AC105185.1-201ENST00000518705 535 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.71□□□□□ -2.3
SSNA1O43805 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.71□□□□□ -2.3
SSNA1O43805 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.71□□□□□ -2.3
SSNA1O43805 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.71□□□□□ -2.3
SSNA1O43805 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.71□□□□□ -2.3
SSNA1O43805 BNIP3P33-201ENST00000598912 569 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 AC097478.2-201ENST00000610572 514 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 AC006927.4-201ENST00000639187 543 ntBASIC0.71□□□□□ -2.3
SSNA1O43805 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.71□□□□□ -2.3
SSNA1O43805 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SSNA1O43805 RNU4-92P-201ENST00000363783 136 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 RNU4-56P-201ENST00000364700 142 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 RNU6-61P-201ENST00000365528 109 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 RNU6-877P-201ENST00000383868 107 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 RNU6-641P-201ENST00000384006 107 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 RNU6-1026P-201ENST00000384465 108 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 MIR515-2-201ENST00000384883 83 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 MIR515-1-201ENST00000384884 83 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 RNU6-1242P-201ENST00000391052 103 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 MTCYBP36-201ENST00000404146 440 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 RNU2-39P-201ENST00000410604 198 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 AC060773.1-201ENST00000421698 310 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.7□□□□□ -2.3
SSNA1O43805 SNORD124-201ENST00000459577 104 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 HSPE1P23-201ENST00000509838 286 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.7□□□□□ -2.3
SSNA1O43805 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 AC091544.4-201ENST00000555268 342 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 MIR3923-201ENST00000579521 83 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 PCGEM1.1-201ENST00000613431 131 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 AL353770.2-201ENST00000620024 78 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 AC019226.2-201ENST00000625973 424 ntBASIC0.7□□□□□ -2.3
SSNA1O43805 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SSNA1O43805 SNORA7.1-201ENST00000363750 139 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SSNA1O43805 AC114482.1-201ENST00000418010 247 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.69□□□□□ -2.3
SSNA1O43805 RPS24P1-201ENST00000438550 371 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AC009474.2-201ENST00000451383 136 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.69□□□□□ -2.3
SSNA1O43805 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.69□□□□□ -2.3
SSNA1O43805 AC007547.1-201ENST00000462177 490 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AC117522.1-201ENST00000509821 380 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.69□□□□□ -2.3
SSNA1O43805 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.69□□□□□ -2.3
SSNA1O43805 RNA5SP384-201ENST00000516615 116 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.69□□□□□ -2.3
SSNA1O43805 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms