Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC068647.1-201ENST00000489539 2265 ntBASIC4.85□□□□□ -1.63
ACTN4O43707 AL592437.2-201ENST00000421655 2434 ntBASIC4.85□□□□□ -1.63
ACTN4O43707 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.85□□□□□ -1.63
ACTN4O43707 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTN4O43707 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTN4O43707 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ACTN4O43707 MIR331-201ENST00000362302 94 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 RNU6-136P-201ENST00000384663 107 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 MIR129-1-201ENST00000384972 72 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 RNA5SP504-201ENST00000410676 117 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 AL591419.1-201ENST00000427423 339 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.84□□□□□ -1.63
ACTN4O43707 Y_RNA.690-201ENST00000516603 95 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 AC006064.5-201ENST00000541782 248 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 AC091178.2-201ENST00000584401 117 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 AC131055.1-201ENST00000584626 316 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.84□□□□□ -1.63
ACTN4O43707 MIR432-201ENST00000606207 94 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 AC099778.2-201ENST00000610904 211 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 AP005019.3-201ENST00000620418 560 ntBASIC4.84□□□□□ -1.63
ACTN4O43707 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ACTN4O43707 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
ACTN4O43707 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ACTN4O43707 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.84□□□□□ -1.64
ACTN4O43707 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
ACTN4O43707 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ACTN4O43707 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.83□□□□□ -1.64
ACTN4O43707 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTN4O43707 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTN4O43707 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACTN4O43707 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
ACTN4O43707 SNORD114-19-201ENST00000363072 75 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 RNA5SP505-201ENST00000364748 108 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 MIR124-3-201ENST00000384866 87 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 MIR493-201ENST00000385254 89 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 Y_RNA.587-201ENST00000391210 103 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTN4O43707 AL139281.1-201ENST00000422120 335 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 AC006466.1-201ENST00000438721 289 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 RPL23AP52-201ENST00000439311 478 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTN4O43707 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTN4O43707 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.83□□□□□ -1.64
ACTN4O43707 RN7SKP19-201ENST00000516016 252 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 RNU6-781P-201ENST00000516377 101 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 RNU6-197P-201ENST00000516680 100 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 ACA59.2-201ENST00000517061 156 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTN4O43707 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTN4O43707 AL034555.1-201ENST00000604816 211 ntBASIC4.83□□□□□ -1.64
ACTN4O43707 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.83□□□□□ -1.64
ACTN4O43707 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
ACTN4O43707 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.83□□□□□ -1.64
ACTN4O43707 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ACTN4O43707 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTN4O43707 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACTN4O43707 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTN4O43707 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ACTN4O43707 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTN4O43707 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTN4O43707 AL513302.2-201ENST00000562313 1842 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTN4O43707 RNU6-978P-201ENST00000364371 103 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 Y_RNA.388-201ENST00000383919 113 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 RNU6-106P-201ENST00000384405 107 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 MIR518C-201ENST00000384822 101 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 PPIAP31-201ENST00000405422 495 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 U6atac.2-201ENST00000408644 118 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 AL590139.1-201ENST00000416267 400 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 AL356387.2-201ENST00000422272 243 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 HMGN2P10-201ENST00000448085 265 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.82□□□□□ -1.64
ACTN4O43707 AC025166.1-201ENST00000612411 163 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 PCGEM1.1-201ENST00000613431 131 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 SNX18P1Y-201ENST00000616231 511 ntBASIC4.82□□□□□ -1.64
ACTN4O43707 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTN4O43707 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTN4O43707 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ACTN4O43707 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
ACTN4O43707 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTN4O43707 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
ACTN4O43707 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.81□□□□□ -1.64
ACTN4O43707 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTN4O43707 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTN4O43707 RNA5SP175-201ENST00000364275 119 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 RNU6-905P-201ENST00000384434 107 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 MIR708-201ENST00000390708 88 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 AL603914.1-201ENST00000401964 204 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 SNORA11F-201ENST00000408237 128 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 EIF4A1P3-201ENST00000411521 244 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTN4O43707 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.81□□□□□ -1.64
ACTN4O43707 RNU6-412P-201ENST00000516434 106 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 EIF4A1P12-201ENST00000551910 141 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTN4O43707 AC105137.2-201ENST00000569073 466 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 AC113403.1-201ENST00000604910 193 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 uc_338.13-201ENST00000618243 179 ntBASIC4.81□□□□□ -1.64
ACTN4O43707 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.81□□□□□ -1.64
ACTN4O43707 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms