Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.15□□□□□ -1.91
PROM1O43490 RPL26P9-201ENST00000457466 433 ntBASIC3.15□□□□□ -1.91
PROM1O43490 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.15□□□□□ -1.91
PROM1O43490 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.15□□□□□ -1.91
PROM1O43490 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.15□□□□□ -1.91
PROM1O43490 RPL23AP94-201ENST00000512518 302 ntBASIC3.15□□□□□ -1.91
PROM1O43490 Y_RNA.706-201ENST00000516933 99 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC091144.1-201ENST00000519573 138 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.15□□□□□ -1.91
PROM1O43490 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.15□□□□□ -1.91
PROM1O43490 AC090517.1-201ENST00000569307 266 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC024153.1-201ENST00000603103 365 ntBASIC3.15□□□□□ -1.91
PROM1O43490 RAC1P9-201ENST00000604990 392 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.15□□□□□ -1.91
PROM1O43490 AL159153.1-201ENST00000619688 317 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC073308.1-201ENST00000623696 305 ntBASIC3.15□□□□□ -1.91
PROM1O43490 AC233981.2-201ENST00000611524 1614 ntBASIC3.15□□□□□ -1.91
PROM1O43490 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.14□□□□□ -1.91
PROM1O43490 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
PROM1O43490 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
PROM1O43490 Y_RNA.358-201ENST00000365491 99 ntBASIC3.14□□□□□ -1.91
PROM1O43490 Y_RNA.461-201ENST00000384263 103 ntBASIC3.14□□□□□ -1.91
PROM1O43490 Y_RNA.471-201ENST00000384312 102 ntBASIC3.14□□□□□ -1.91
PROM1O43490 Y_RNA.500-201ENST00000384466 111 ntBASIC3.14□□□□□ -1.91
PROM1O43490 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PROM1O43490 SNORA12.2-201ENST00000391040 156 ntBASIC3.14□□□□□ -1.91
PROM1O43490 RPL21P1-201ENST00000399532 476 ntBASIC3.14□□□□□ -1.91
PROM1O43490 MIR190B-201ENST00000401119 79 ntBASIC3.14□□□□□ -1.91
PROM1O43490 AP000275.1-201ENST00000411943 390 ntBASIC3.14□□□□□ -1.91
PROM1O43490 AC073910.1-201ENST00000445047 438 ntBASIC3.14□□□□□ -1.91
PROM1O43490 SNRPGP7-201ENST00000469016 106 ntBASIC3.14□□□□□ -1.91
PROM1O43490 RN7SL283P-201ENST00000489055 303 ntBASIC3.14□□□□□ -1.91
PROM1O43490 RPS29P20-201ENST00000489592 171 ntBASIC3.14□□□□□ -1.91
PROM1O43490 RNU7-175P-201ENST00000515915 61 ntBASIC3.14□□□□□ -1.91
PROM1O43490 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.14□□□□□ -1.91
PROM1O43490 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.14□□□□□ -1.91
PROM1O43490 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.14□□□□□ -1.91
PROM1O43490 RPL23AP78-201ENST00000599928 470 ntBASIC3.14□□□□□ -1.91
PROM1O43490 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
PROM1O43490 MIR8062-201ENST00000621515 85 ntBASIC3.14□□□□□ -1.91
PROM1O43490 MIR6852-201ENST00000621699 66 ntBASIC3.14□□□□□ -1.91
PROM1O43490 MTND5P7-201ENST00000413558 1798 ntBASIC3.14□□□□□ -1.91
PROM1O43490 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PROM1O43490 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PROM1O43490 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PROM1O43490 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PROM1O43490 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
PROM1O43490 SNORD56.1-201ENST00000362913 68 ntBASIC3.13□□□□□ -1.91
PROM1O43490 Y_RNA.222-201ENST00000364264 102 ntBASIC3.13□□□□□ -1.91
PROM1O43490 RNU6-968P-201ENST00000384076 107 ntBASIC3.13□□□□□ -1.91
PROM1O43490 RNU6-708P-201ENST00000384217 107 ntBASIC3.13□□□□□ -1.91
PROM1O43490 MT-TG-201ENST00000387429 68 ntBASIC3.13□□□□□ -1.91
PROM1O43490 MTCYBP2-201ENST00000407745 171 ntBASIC3.13□□□□□ -1.91
PROM1O43490 ELOCP20-201ENST00000422460 345 ntBASIC3.13□□□□□ -1.91
PROM1O43490 AC005300.1-201ENST00000428401 373 ntBASIC3.13□□□□□ -1.91
PROM1O43490 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
PROM1O43490 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.13□□□□□ -1.91
PROM1O43490 RPS27AP10-201ENST00000496103 208 ntBASIC3.13□□□□□ -1.91
PROM1O43490 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
PROM1O43490 RNU6-911P-201ENST00000516523 104 ntBASIC3.13□□□□□ -1.91
PROM1O43490 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.13□□□□□ -1.91
PROM1O43490 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PROM1O43490 HSPE1P20-201ENST00000538133 289 ntBASIC3.13□□□□□ -1.91
PROM1O43490 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.13□□□□□ -1.91
PROM1O43490 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
PROM1O43490 AC060766.3-201ENST00000591442 263 ntBASIC3.13□□□□□ -1.91
PROM1O43490 AC125232.2-201ENST00000592457 143 ntBASIC3.13□□□□□ -1.91
PROM1O43490 AC062037.2-201ENST00000610137 73 ntBASIC3.13□□□□□ -1.91
PROM1O43490 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
PROM1O43490 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
PROM1O43490 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.13□□□□□ -1.91
PROM1O43490 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PROM1O43490 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PROM1O43490 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PROM1O43490 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
PROM1O43490 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PROM1O43490 RNU6-942P-201ENST00000363002 107 ntBASIC3.12□□□□□ -1.91
PROM1O43490 Y_RNA.214-201ENST00000364201 112 ntBASIC3.12□□□□□ -1.91
PROM1O43490 Y_RNA.288-201ENST00000364854 92 ntBASIC3.12□□□□□ -1.91
PROM1O43490 Y_RNA.307-201ENST00000365022 117 ntBASIC3.12□□□□□ -1.91
PROM1O43490 RNU1-140P-201ENST00000365040 165 ntBASIC3.12□□□□□ -1.91
PROM1O43490 RNU6-1280P-201ENST00000365211 107 ntBASIC3.12□□□□□ -1.91
PROM1O43490 RNU1-100P-201ENST00000365255 165 ntBASIC3.12□□□□□ -1.91
PROM1O43490 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PROM1O43490 SNORA48.5-201ENST00000391143 135 ntBASIC3.12□□□□□ -1.91
PROM1O43490 U3.26-201ENST00000391236 204 ntBASIC3.12□□□□□ -1.91
PROM1O43490 MIR1302-6-201ENST00000408466 90 ntBASIC3.12□□□□□ -1.91
PROM1O43490 NDUFS5P4-201ENST00000412983 318 ntBASIC3.12□□□□□ -1.91
PROM1O43490 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.12□□□□□ -1.91
PROM1O43490 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.12□□□□□ -1.91
PROM1O43490 AC099548.1-201ENST00000421443 426 ntBASIC3.12□□□□□ -1.91
PROM1O43490 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.12□□□□□ -1.91
PROM1O43490 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
PROM1O43490 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
PROM1O43490 AL353705.4-201ENST00000449661 238 ntBASIC3.12□□□□□ -1.91
PROM1O43490 AL513124.1-201ENST00000450410 614 ntBASIC3.12□□□□□ -1.91
PROM1O43490 AC012308.1-201ENST00000451232 178 ntBASIC3.12□□□□□ -1.91
PROM1O43490 TOMM22P6-201ENST00000465035 409 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms