Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH5O43196 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH5O43196 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
MSH5O43196 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MSH5O43196 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
MSH5O43196 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
MSH5O43196 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC7.32□□□□□ -1.24
MSH5O43196 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
MSH5O43196 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC7.32□□□□□ -1.24
MSH5O43196 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
MSH5O43196 RNU6-1010P-201ENST00000362757 107 ntBASIC7.32□□□□□ -1.24
MSH5O43196 MIR141-201ENST00000384975 95 ntBASIC7.32□□□□□ -1.24
MSH5O43196 MIR522-201ENST00000385071 87 ntBASIC7.32□□□□□ -1.24
MSH5O43196 RPL23AP48-201ENST00000406913 488 ntBASIC7.32□□□□□ -1.24
MSH5O43196 GOT2P5-201ENST00000433995 546 ntBASIC7.32□□□□□ -1.24
MSH5O43196 AL135938.1-201ENST00000443141 297 ntBASIC7.32□□□□□ -1.24
MSH5O43196 RN7SKP288-201ENST00000516227 268 ntBASIC7.32□□□□□ -1.24
MSH5O43196 AC012676.2-201ENST00000619258 186 ntBASIC7.32□□□□□ -1.24
MSH5O43196 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC7.32□□□□□ -1.24
MSH5O43196 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MSH5O43196 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MSH5O43196 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.32□□□□□ -1.24
MSH5O43196 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MSH5O43196 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
MSH5O43196 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC7.31□□□□□ -1.24
MSH5O43196 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.31□□□□□ -1.24
MSH5O43196 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
MSH5O43196 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
MSH5O43196 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
MSH5O43196 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
MSH5O43196 SNORD14E-201ENST00000364009 85 ntBASIC7.31□□□□□ -1.24
MSH5O43196 RNU6-629P-201ENST00000384061 103 ntBASIC7.31□□□□□ -1.24
MSH5O43196 SNORA27-201ENST00000384323 126 ntBASIC7.31□□□□□ -1.24
MSH5O43196 MIR206-201ENST00000384872 86 ntBASIC7.31□□□□□ -1.24
MSH5O43196 SRSF1P1-201ENST00000424058 520 ntBASIC7.31□□□□□ -1.24
MSH5O43196 AC023424.1-201ENST00000496058 459 ntBASIC7.31□□□□□ -1.24
MSH5O43196 RNU6-513P-201ENST00000516104 104 ntBASIC7.31□□□□□ -1.24
MSH5O43196 MIR4433B-201ENST00000581329 102 ntBASIC7.31□□□□□ -1.24
MSH5O43196 FAM106DP-201ENST00000586416 501 ntBASIC7.31□□□□□ -1.24
MSH5O43196 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC7.31□□□□□ -1.24
MSH5O43196 AC006115.2-201ENST00000596823 202 ntBASIC7.31□□□□□ -1.24
MSH5O43196 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
MSH5O43196 AC096644.4-201ENST00000563417 2912 ntBASIC7.3□□□□□ -1.24
MSH5O43196 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
MSH5O43196 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
MSH5O43196 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
MSH5O43196 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
MSH5O43196 RNU6-208P-201ENST00000362431 107 ntBASIC7.3□□□□□ -1.24
MSH5O43196 RNU6-1210P-201ENST00000363775 107 ntBASIC7.3□□□□□ -1.24
MSH5O43196 RNA5SP239-201ENST00000410218 129 ntBASIC7.3□□□□□ -1.24
MSH5O43196 MIR4480-201ENST00000582492 71 ntBASIC7.3□□□□□ -1.24
MSH5O43196 AC010680.1-201ENST00000590024 3590 ntBASIC7.3□□□□□ -1.24
MSH5O43196 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 RNU6-369P-201ENST00000362515 102 ntBASIC7.29□□□□□ -1.24
MSH5O43196 RNU6-330P-201ENST00000363015 107 ntBASIC7.29□□□□□ -1.24
MSH5O43196 RNA5SP211-201ENST00000365516 117 ntBASIC7.29□□□□□ -1.24
MSH5O43196 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
MSH5O43196 SNRPGP14-201ENST00000435400 219 ntBASIC7.29□□□□□ -1.24
MSH5O43196 AC011753.3-201ENST00000443436 406 ntBASIC7.29□□□□□ -1.24
MSH5O43196 AL691482.2-201ENST00000457453 84 ntBASIC7.29□□□□□ -1.24
MSH5O43196 RNU7-34P-201ENST00000459394 64 ntBASIC7.29□□□□□ -1.24
MSH5O43196 PARP4P3-201ENST00000510265 317 ntBASIC7.29□□□□□ -1.24
MSH5O43196 RNU6-948P-201ENST00000516374 107 ntBASIC7.29□□□□□ -1.24
MSH5O43196 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC7.29□□□□□ -1.24
MSH5O43196 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
MSH5O43196 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.29□□□□□ -1.24
MSH5O43196 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC7.29□□□□□ -1.24
MSH5O43196 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MSH5O43196 AC104260.2-201ENST00000623551 3497 ntBASIC7.29□□□□□ -1.24
MSH5O43196 AC004656.1-201ENST00000568479 4951 ntBASIC7.29□□□□□ -1.24
MSH5O43196 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH5O43196 AL133243.3-201ENST00000617415 3004 ntBASIC7.28□□□□□ -1.24
MSH5O43196 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH5O43196 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.28□□□□□ -1.24
MSH5O43196 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
MSH5O43196 DNM1P47-203ENST00000571780 12667 ntBASIC7.28□□□□□ -1.24
MSH5O43196 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH5O43196 MIR337-201ENST00000362281 93 ntBASIC7.28□□□□□ -1.24
MSH5O43196 RNA5SP183-201ENST00000362452 119 ntBASIC7.28□□□□□ -1.24
MSH5O43196 RNA5SP133-201ENST00000363368 119 ntBASIC7.28□□□□□ -1.24
MSH5O43196 RNA5SP138-201ENST00000365098 114 ntBASIC7.28□□□□□ -1.24
MSH5O43196 RNU1-106P-201ENST00000384382 164 ntBASIC7.28□□□□□ -1.24
MSH5O43196 SNORA2B-201ENST00000384583 137 ntBASIC7.28□□□□□ -1.24
MSH5O43196 AC093162.1-201ENST00000419682 124 ntBASIC7.28□□□□□ -1.24
MSH5O43196 GNG5P5-201ENST00000420444 220 ntBASIC7.28□□□□□ -1.24
MSH5O43196 REREP1Y-201ENST00000422655 198 ntBASIC7.28□□□□□ -1.24
MSH5O43196 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC7.28□□□□□ -1.24
MSH5O43196 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.28□□□□□ -1.24
MSH5O43196 AL671862.1-201ENST00000515851 349 ntBASIC7.28□□□□□ -1.24
MSH5O43196 RNU6-826P-201ENST00000516827 104 ntBASIC7.28□□□□□ -1.24
MSH5O43196 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MSH5O43196 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
MSH5O43196 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms