Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL590135.1-201ENST00000422215 156 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 EIF4EP2-201ENST00000422816 654 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC019205.3-201ENST00000424573 156 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC016700.2-201ENST00000446011 156 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.8□□□□□ -2.12
CLDN3O15551 SNORD13-201ENST00000459299 104 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC015911.1-201ENST00000495111 156 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC022447.4-201ENST00000504053 364 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 RNU2-69P-201ENST00000516061 100 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 Y_RNA.717-201ENST00000517106 92 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.8□□□□□ -2.12
CLDN3O15551 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CLDN3O15551 GNAI2P1-201ENST00000541815 315 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.8□□□□□ -2.12
CLDN3O15551 HSBP1P1-201ENST00000555205 166 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 SUB1P2-201ENST00000556401 297 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.8□□□□□ -2.12
CLDN3O15551 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.8□□□□□ -2.12
CLDN3O15551 MIR3124-201ENST00000582636 67 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 BNIP3P16-201ENST00000589779 534 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 RSL24D1P11-201ENST00000591045 491 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 Z94722.1-201ENST00000604328 474 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLDN3O15551 AC233981.2-201ENST00000611524 1614 ntBASIC1.8□□□□□ -2.12
CLDN3O15551 RNU6-1141P-201ENST00000364520 107 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 RNU6-43P-201ENST00000384302 107 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC010975.2-201ENST00000427781 588 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC244670.1-201ENST00000436879 112 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.79□□□□□ -2.12
CLDN3O15551 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.79□□□□□ -2.12
CLDN3O15551 SCARNA18-201ENST00000459004 134 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 MTCO2P6-201ENST00000463134 685 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC079382.1-201ENST00000493346 557 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.79□□□□□ -2.12
CLDN3O15551 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLDN3O15551 RNA5SP490-201ENST00000517141 136 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AP005435.4-201ENST00000529514 284 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.79□□□□□ -2.12
CLDN3O15551 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.79□□□□□ -2.12
CLDN3O15551 MIR3913-1-201ENST00000577744 102 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 MIR3136-201ENST00000583498 78 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC008752.3-201ENST00000588113 712 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC040904.1-201ENST00000590850 223 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC110760.3-201ENST00000598794 467 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.79□□□□□ -2.12
CLDN3O15551 AC002044.1-201ENST00000606707 158 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 AC008536.2-201ENST00000607284 349 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CLDN3O15551 AC072046.2-201ENST00000618366 268 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.79□□□□□ -2.12
CLDN3O15551 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CLDN3O15551 MTND4P23-201ENST00000447723 1363 ntBASIC1.79□□□□□ -2.12
CLDN3O15551 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CLDN3O15551 AC006026.1-201ENST00000444025 1803 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CLDN3O15551 RNA5SP99-201ENST00000364020 114 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 RNU4-56P-201ENST00000364700 142 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 RNU6-1127P-201ENST00000384580 107 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 SNORA16.2-201ENST00000390991 127 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 RNA5SP213-201ENST00000391031 106 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 RNU6-482P-201ENST00000391068 107 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN3O15551 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN3O15551 AL358934.1-201ENST00000432346 324 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN3O15551 C1DP4-201ENST00000455429 424 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN3O15551 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN3O15551 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.78□□□□□ -2.12
CLDN3O15551 AC079140.5-201ENST00000507882 310 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 AK3P2-201ENST00000507976 429 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN3O15551 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.78□□□□□ -2.12
CLDN3O15551 MIR4769-201ENST00000584126 77 ntBASIC1.78□□□□□ -2.12
CLDN3O15551 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CLDN3O15551 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.77□□□□□ -2.13
CLDN3O15551 MTND4P14-201ENST00000435799 1354 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 RNU6-142P-201ENST00000384019 107 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 RNU6-606P-201ENST00000384721 111 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 VN1R36P-201ENST00000414936 291 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.77□□□□□ -2.13
CLDN3O15551 HSPE1P21-201ENST00000438283 308 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
CLDN3O15551 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.77□□□□□ -2.13
CLDN3O15551 HSPE1P4-201ENST00000550617 308 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.77□□□□□ -2.13
CLDN3O15551 NIFKP6-201ENST00000598115 845 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 AC068790.2-201ENST00000602601 557 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 AL590240.4-201ENST00000616908 390 ntBASIC1.77□□□□□ -2.13
CLDN3O15551 AP000560.1-201ENST00000624150 1937 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
CLDN3O15551 RNA5SP493-201ENST00000364115 91 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 RNU6-266P-201ENST00000364225 107 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 SNORD32B-201ENST00000364460 84 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 RNU6-827P-201ENST00000365553 106 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms