Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 CBX3P9-201ENST00000402326 552 ntBASIC3.12□□□□□ -1.91
APAF1O14727 AC074085.1-201ENST00000413598 418 ntBASIC3.12□□□□□ -1.91
APAF1O14727 MTND4LP11-201ENST00000422184 280 ntBASIC3.12□□□□□ -1.91
APAF1O14727 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.12□□□□□ -1.91
APAF1O14727 MTND1P11-201ENST00000456661 876 ntBASIC3.12□□□□□ -1.91
APAF1O14727 CYP2C59P-201ENST00000457790 269 ntBASIC3.12□□□□□ -1.91
APAF1O14727 HMGN1P12-201ENST00000499125 195 ntBASIC3.12□□□□□ -1.91
APAF1O14727 AC016632.1-201ENST00000503994 196 ntBASIC3.12□□□□□ -1.91
APAF1O14727 RNU1-54P-201ENST00000517181 120 ntBASIC3.12□□□□□ -1.91
APAF1O14727 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.12□□□□□ -1.91
APAF1O14727 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.12□□□□□ -1.91
APAF1O14727 AC124303.1-201ENST00000605703 360 ntBASIC3.12□□□□□ -1.91
APAF1O14727 AL355073.2-201ENST00000612106 557 ntBASIC3.12□□□□□ -1.91
APAF1O14727 AC025253.1-201ENST00000613623 543 ntBASIC3.12□□□□□ -1.91
APAF1O14727 MIR5739-201ENST00000619803 80 ntBASIC3.12□□□□□ -1.91
APAF1O14727 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
APAF1O14727 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APAF1O14727 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
APAF1O14727 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
APAF1O14727 MIR6073-201ENST00000352083 89 ntBASIC3.11□□□□□ -1.91
APAF1O14727 RNU4-82P-201ENST00000362443 140 ntBASIC3.11□□□□□ -1.91
APAF1O14727 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.11□□□□□ -1.91
APAF1O14727 AC236972.1-201ENST00000433225 199 ntBASIC3.11□□□□□ -1.91
APAF1O14727 AC018634.1-201ENST00000437554 401 ntBASIC3.11□□□□□ -1.91
APAF1O14727 MTND4P18-201ENST00000447010 465 ntBASIC3.11□□□□□ -1.91
APAF1O14727 AC107399.1-201ENST00000451226 265 ntBASIC3.11□□□□□ -1.91
APAF1O14727 AL121594.1-201ENST00000475906 575 ntBASIC3.11□□□□□ -1.91
APAF1O14727 RNU6-273P-201ENST00000516937 96 ntBASIC3.11□□□□□ -1.91
APAF1O14727 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.11□□□□□ -1.91
APAF1O14727 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.11□□□□□ -1.91
APAF1O14727 AC005730.3-201ENST00000583067 366 ntBASIC3.11□□□□□ -1.91
APAF1O14727 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.11□□□□□ -1.91
APAF1O14727 AC078795.3-201ENST00000602913 472 ntBASIC3.11□□□□□ -1.91
APAF1O14727 AC019193.3-201ENST00000609144 554 ntBASIC3.11□□□□□ -1.91
APAF1O14727 AL008636.1-201ENST00000625038 1018 ntBASIC3.11□□□□□ -1.91
APAF1O14727 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.11□□□□□ -1.91
APAF1O14727 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.1□□□□□ -1.91
APAF1O14727 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APAF1O14727 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APAF1O14727 RNU4-56P-201ENST00000364700 142 ntBASIC3.1□□□□□ -1.91
APAF1O14727 RNA5SP240-201ENST00000365355 128 ntBASIC3.1□□□□□ -1.91
APAF1O14727 RNU6-790P-201ENST00000384479 105 ntBASIC3.1□□□□□ -1.91
APAF1O14727 RNU6-1140P-201ENST00000410517 106 ntBASIC3.1□□□□□ -1.91
APAF1O14727 RNA5SP492-201ENST00000411330 114 ntBASIC3.1□□□□□ -1.91
APAF1O14727 AC244670.1-201ENST00000436879 112 ntBASIC3.1□□□□□ -1.91
APAF1O14727 HMGB1P18-201ENST00000438801 619 ntBASIC3.1□□□□□ -1.91
APAF1O14727 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.1□□□□□ -1.91
APAF1O14727 MTND5P20-201ENST00000448677 143 ntBASIC3.1□□□□□ -1.91
APAF1O14727 RNU7-187P-201ENST00000458985 68 ntBASIC3.1□□□□□ -1.91
APAF1O14727 SNORA59A-201ENST00000459326 152 ntBASIC3.1□□□□□ -1.91
APAF1O14727 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.1□□□□□ -1.91
APAF1O14727 AIG1P1-201ENST00000503376 148 ntBASIC3.1□□□□□ -1.91
APAF1O14727 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.1□□□□□ -1.91
APAF1O14727 Y_RNA.682-201ENST00000516457 100 ntBASIC3.1□□□□□ -1.91
APAF1O14727 Y_RNA.691-201ENST00000516611 103 ntBASIC3.1□□□□□ -1.91
APAF1O14727 RNU6-567P-201ENST00000516746 107 ntBASIC3.1□□□□□ -1.91
APAF1O14727 RNU6-826P-201ENST00000516827 104 ntBASIC3.1□□□□□ -1.91
APAF1O14727 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
APAF1O14727 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.1□□□□□ -1.91
APAF1O14727 AL670379.2-201ENST00000604983 252 ntBASIC3.1□□□□□ -1.91
APAF1O14727 AC008121.3-201ENST00000618726 433 ntBASIC3.1□□□□□ -1.91
APAF1O14727 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APAF1O14727 MIR548K-201ENST00000408406 116 ntBASIC3.09□□□□□ -1.91
APAF1O14727 RNU2-63P-201ENST00000410792 194 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AIMP1P2-201ENST00000425294 312 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AL353572.1-201ENST00000442490 417 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AL031659.1-201ENST00000447075 539 ntBASIC3.09□□□□□ -1.91
APAF1O14727 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.09□□□□□ -1.91
APAF1O14727 AC008571.1-201ENST00000467232 300 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.09□□□□□ -1.91
APAF1O14727 MTND5P5-201ENST00000503764 376 ntBASIC3.09□□□□□ -1.91
APAF1O14727 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.09□□□□□ -1.91
APAF1O14727 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.09□□□□□ -1.91
APAF1O14727 ACA59.1-201ENST00000515966 143 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
APAF1O14727 HSPE1P4-201ENST00000550617 308 ntBASIC3.09□□□□□ -1.91
APAF1O14727 POLR3GP2-201ENST00000588366 668 ntBASIC3.09□□□□□ -1.91
APAF1O14727 RPL30P11-203ENST00000598995 310 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AL161423.1-201ENST00000613700 262 ntBASIC3.09□□□□□ -1.91
APAF1O14727 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AC010297.1-201ENST00000623948 149 ntBASIC3.09□□□□□ -1.91
APAF1O14727 AC009541.1-201ENST00000438279 2662 ntBASIC3.09□□□□□ -1.91
APAF1O14727 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
APAF1O14727 SNORD114-30-201ENST00000364448 72 ntBASIC3.08□□□□□ -1.92
APAF1O14727 SNORD81.2-201ENST00000365153 76 ntBASIC3.08□□□□□ -1.92
APAF1O14727 RNU6-596P-201ENST00000365395 98 ntBASIC3.08□□□□□ -1.92
APAF1O14727 MIR517A-201ENST00000385001 87 ntBASIC3.08□□□□□ -1.92
APAF1O14727 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APAF1O14727 RNU6-220P-201ENST00000390919 107 ntBASIC3.08□□□□□ -1.92
APAF1O14727 SNORA26.3-201ENST00000391119 136 ntBASIC3.08□□□□□ -1.92
APAF1O14727 RNA5SP181-201ENST00000410246 98 ntBASIC3.08□□□□□ -1.92
APAF1O14727 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.08□□□□□ -1.92
APAF1O14727 AL590632.1-201ENST00000424289 371 ntBASIC3.08□□□□□ -1.92
APAF1O14727 AC008267.5-201ENST00000424928 265 ntBASIC3.08□□□□□ -1.92
APAF1O14727 RPS15AP28-201ENST00000435088 386 ntBASIC3.08□□□□□ -1.92
APAF1O14727 MTATP6P23-201ENST00000440153 476 ntBASIC3.08□□□□□ -1.92
APAF1O14727 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.08□□□□□ -1.92
APAF1O14727 AC073901.1-201ENST00000462471 408 ntBASIC3.08□□□□□ -1.92
APAF1O14727 RPS29P27-201ENST00000463711 170 ntBASIC3.08□□□□□ -1.92
APAF1O14727 AC104564.1-201ENST00000493028 407 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms