Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.01□□□□□ -2.41
CHD1O14646 RNU6-858P-201ENST00000362436 107 ntBASIC0□□□□□ -2.41
CHD1O14646 RNU6-1010P-201ENST00000362757 107 ntBASIC0□□□□□ -2.41
CHD1O14646 RNU1-39P-201ENST00000383897 165 ntBASIC0□□□□□ -2.41
CHD1O14646 SNORA80D-201ENST00000384488 135 ntBASIC0□□□□□ -2.41
CHD1O14646 PDCL2P1-201ENST00000419302 352 ntBASIC0□□□□□ -2.41
CHD1O14646 MTCO2P5-201ENST00000422621 426 ntBASIC0□□□□□ -2.41
CHD1O14646 MTCO1P57-201ENST00000432182 261 ntBASIC0□□□□□ -2.41
CHD1O14646 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0□□□□□ -2.41
CHD1O14646 MTCO2P25-201ENST00000447065 681 ntBASIC0□□□□□ -2.41
CHD1O14646 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0□□□□□ -2.41
CHD1O14646 U7.7-201ENST00000459276 60 ntBASIC0□□□□□ -2.41
CHD1O14646 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0□□□□□ -2.41
CHD1O14646 RNU6-927P-201ENST00000516199 100 ntBASIC0□□□□□ -2.41
CHD1O14646 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0□□□□□ -2.41
CHD1O14646 AC026371.1-201ENST00000551867 419 ntBASIC0□□□□□ -2.41
CHD1O14646 AL596245.1-201ENST00000618994 362 ntBASIC0□□□□□ -2.41
CHD1O14646 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.01□□□□□ -2.41
CHD1O14646 COX6CP10-201ENST00000416832 224 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.01□□□□□ -2.41
CHD1O14646 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHD1O14646 GTF2IP3-201ENST00000433887 494 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AC108740.1-201ENST00000498629 225 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 MTND5P13-201ENST00000513046 1079 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AL356057.1-201ENST00000533798 831 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AL442163.3-201ENST00000554110 156 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AC013244.3-201ENST00000605614 388 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 RNU6-252P-201ENST00000363232 107 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 RNU6-950P-201ENST00000384651 107 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 SNORD89-201ENST00000390981 114 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHD1O14646 MTATP6P30-201ENST00000443540 664 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AL031313.1-201ENST00000448435 256 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHD1O14646 RAC1P9-201ENST00000604990 392 ntBASIC-0.01□□□□□ -2.41
CHD1O14646 RNU4-79P-201ENST00000362764 141 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 RNU6-862P-201ENST00000362804 105 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 MIR7-1-201ENST00000384871 110 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.02□□□□□ -2.41
CHD1O14646 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.02□□□□□ -2.41
CHD1O14646 snoU13.30-201ENST00000458951 104 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 RNU7-90P-201ENST00000459216 62 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 AC009646.1-201ENST00000510455 318 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 AC110760.3-202ENST00000515177 371 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 RNU6-143P-201ENST00000516942 93 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 MIR4315-1-201ENST00000636800 73 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 MIR4315-2-201ENST00000640925 73 ntBASIC-0.02□□□□□ -2.41
CHD1O14646 BX664727.1-201ENST00000416024 466 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHD1O14646 RNU6-572P-201ENST00000516724 80 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.03□□□□□ -2.41
CHD1O14646 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHD1O14646 AC115989.2-201ENST00000578640 563 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 AP002906.1-201ENST00000603405 233 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 AC007363.1-201ENST00000604736 620 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 AC021506.2-201ENST00000612354 169 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 AC009032.1-201ENST00000617574 431 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 AC120349.3-201ENST00000624377 529 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 MTND4P21-201ENST00000453886 1357 ntBASIC-0.03□□□□□ -2.41
CHD1O14646 RNU6-432P-201ENST00000384196 109 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 RNU6-793P-201ENST00000384233 104 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 MIR153-2-201ENST00000385225 87 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD1O14646 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD1O14646 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD1O14646 AC060771.1-201ENST00000582031 164 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 RNU6-302P-201ENST00000365249 107 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 RNY3-201ENST00000365484 102 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 AL590084.2-201ENST00000401481 382 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.04□□□□□ -2.42
CHD1O14646 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD1O14646 AL049830.1-201ENST00000468034 425 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD1O14646 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD1O14646 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 AC130324.3-201ENST00000614165 542 ntBASIC-0.04□□□□□ -2.42
CHD1O14646 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CHD1O14646 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
CHD1O14646 RNA5SP259-201ENST00000365541 109 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 RNU6V-201ENST00000384105 107 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.05□□□□□ -2.42
CHD1O14646 RNU2-23P-201ENST00000410545 195 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.05□□□□□ -2.42
CHD1O14646 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.05□□□□□ -2.42
CHD1O14646 AC073910.1-201ENST00000445047 438 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 RPS26P48-201ENST00000491713 339 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.05□□□□□ -2.42
CHD1O14646 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.05□□□□□ -2.42
CHD1O14646 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.05□□□□□ -2.42
CHD1O14646 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.05□□□□□ -2.42
CHD1O14646 AC069114.2-201ENST00000604699 304 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 LARP7P1-201ENST00000605576 316 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms