Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
CBX4O00257 GABRG2-229ENST00000641017 3628 ntBASIC3.44□□□□□ -1.86
CBX4O00257 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CBX4O00257 AL365361.1-201ENST00000566942 3481 ntBASIC3.44□□□□□ -1.86
CBX4O00257 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CBX4O00257 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CBX4O00257 SNORA36A-201ENST00000384221 132 ntBASIC3.44□□□□□ -1.86
CBX4O00257 Y_RNA.551-201ENST00000384661 102 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
CBX4O00257 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CBX4O00257 AC012306.1-201ENST00000423267 114 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.44□□□□□ -1.86
CBX4O00257 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX4O00257 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.44□□□□□ -1.86
CBX4O00257 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.44□□□□□ -1.86
CBX4O00257 AL136097.1-201ENST00000456945 913 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AC090525.1-201ENST00000479116 478 ntBASIC3.44□□□□□ -1.86
CBX4O00257 RN7SL504P-201ENST00000494496 287 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AIG1P1-201ENST00000503376 148 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AC110794.1-201ENST00000505816 425 ntBASIC3.44□□□□□ -1.86
CBX4O00257 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX4O00257 AC109329.1-201ENST00000518744 317 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AC131281.1-201ENST00000522984 164 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX4O00257 AL159153.1-201ENST00000619688 317 ntBASIC3.44□□□□□ -1.86
CBX4O00257 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX4O00257 SCARNA15.3-201ENST00000626315 122 ntBASIC3.44□□□□□ -1.86
CBX4O00257 SCARNA4.1-201ENST00000628597 123 ntBASIC3.44□□□□□ -1.86
CBX4O00257 AC110079.1-202ENST00000635213 138 ntBASIC3.44□□□□□ -1.86
CBX4O00257 SNORD98-201ENST00000636377 67 ntBASIC3.44□□□□□ -1.86
CBX4O00257 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CBX4O00257 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CBX4O00257 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX4O00257 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CBX4O00257 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.43□□□□□ -1.86
CBX4O00257 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CBX4O00257 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CBX4O00257 Y_RNA.27-201ENST00000362540 103 ntBASIC3.43□□□□□ -1.86
CBX4O00257 RNU1-76P-201ENST00000362903 159 ntBASIC3.43□□□□□ -1.86
CBX4O00257 RNA5SP374-201ENST00000362939 125 ntBASIC3.43□□□□□ -1.86
CBX4O00257 RPL21P75-201ENST00000396599 483 ntBASIC3.43□□□□□ -1.86
CBX4O00257 RPL21P28-201ENST00000401418 483 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AL590556.1-201ENST00000423231 483 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AL358075.3-201ENST00000426289 226 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AC009414.1-201ENST00000427200 443 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.43□□□□□ -1.86
CBX4O00257 RPL21P39-201ENST00000463605 483 ntBASIC3.43□□□□□ -1.86
CBX4O00257 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.43□□□□□ -1.86
CBX4O00257 AC010655.3-201ENST00000478818 450 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AC087190.1-201ENST00000484462 480 ntBASIC3.43□□□□□ -1.86
CBX4O00257 RPL36AP48-201ENST00000485521 314 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AC107032.1-201ENST00000485945 480 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AC132942.1-201ENST00000486753 483 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AC093591.1-201ENST00000491435 481 ntBASIC3.43□□□□□ -1.86
CBX4O00257 RPL21P16-201ENST00000495531 483 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AC107934.2-201ENST00000518653 310 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AL442163.3-201ENST00000554110 156 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.43□□□□□ -1.86
CBX4O00257 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.43□□□□□ -1.86
CBX4O00257 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.43□□□□□ -1.86
CBX4O00257 MIR3186-201ENST00000577404 85 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AC073410.2-201ENST00000603240 332 ntBASIC3.43□□□□□ -1.86
CBX4O00257 RNVU1-4-201ENST00000612985 164 ntBASIC3.43□□□□□ -1.86
CBX4O00257 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.43□□□□□ -1.86
CBX4O00257 AL450472.1-202ENST00000637286 180 ntBASIC3.43□□□□□ -1.86
CBX4O00257 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CBX4O00257 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CBX4O00257 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
CBX4O00257 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX4O00257 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX4O00257 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CBX4O00257 Y_RNA.47-201ENST00000362697 108 ntBASIC3.42□□□□□ -1.86
CBX4O00257 Y_RNA.210-201ENST00000364161 110 ntBASIC3.42□□□□□ -1.86
CBX4O00257 Y_RNA.319-201ENST00000365138 92 ntBASIC3.42□□□□□ -1.86
CBX4O00257 RNU6-1027P-201ENST00000383998 107 ntBASIC3.42□□□□□ -1.86
CBX4O00257 Y_RNA.574-201ENST00000384766 95 ntBASIC3.42□□□□□ -1.86
CBX4O00257 MIR184-201ENST00000384962 84 ntBASIC3.42□□□□□ -1.86
CBX4O00257 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
CBX4O00257 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CBX4O00257 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.42□□□□□ -1.86
CBX4O00257 RNU6-1114P-201ENST00000516022 107 ntBASIC3.42□□□□□ -1.86
CBX4O00257 AC022868.1-201ENST00000517767 391 ntBASIC3.42□□□□□ -1.86
CBX4O00257 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX4O00257 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX4O00257 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.42□□□□□ -1.86
CBX4O00257 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.42□□□□□ -1.86
CBX4O00257 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.42□□□□□ -1.86
CBX4O00257 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.42□□□□□ -1.86
CBX4O00257 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX4O00257 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.42□□□□□ -1.86
CBX4O00257 UCA1.1-201ENST00000620952 75 ntBASIC3.42□□□□□ -1.86
CBX4O00257 MIR6852-201ENST00000621699 66 ntBASIC3.42□□□□□ -1.86
CBX4O00257 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.42□□□□□ -1.86
CBX4O00257 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX4O00257 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX4O00257 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CBX4O00257 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CBX4O00257 AL356274.2-201ENST00000624379 3752 ntBASIC3.41□□□□□ -1.86
CBX4O00257 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
CBX4O00257 AL109809.4-201ENST00000603520 2185 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms