Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 VN1R80P-201ENST00000597126 338 ntBASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 AC073534.2-201ENST00000620377 381 ntBASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 AL359880.1-201ENST00000621879 266 ntBASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 MTND4P1-201ENST00000457501 1466 ntBASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA2E9PIF3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RNU6-944P-201ENST00000364023 107 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 Y_RNA.372-201ENST00000365599 102 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RNU6-38P-201ENST00000384085 107 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 SNORD73A-201ENST00000386062 65 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RNU2-32P-201ENST00000411193 191 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 MTCO3P41-201ENST00000414801 328 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AL117339.3-201ENST00000418733 162 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AL589823.1-201ENST00000429577 183 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AL137159.1-201ENST00000452808 512 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RNU6-333P-201ENST00000459117 107 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RPL21P99-201ENST00000480369 423 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AC079140.5-201ENST00000507882 310 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RNU6-965P-201ENST00000516721 96 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 RNU6-667P-201ENST00000517186 102 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 OR11H5P-201ENST00000554039 926 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 AC004908.3-201ENST00000610248 625 ntBASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
NPIPA2E9PIF3 Y_RNA.318-201ENST00000365131 97 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 RNU4-20P-201ENST00000365601 151 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 MIR29B2-201ENST00000385055 81 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 USP9YP18-201ENST00000425912 695 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 AL591806.2-201ENST00000433122 173 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 MTND1P1-201ENST00000445453 368 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 AC013470.1-201ENST00000453438 462 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 PMCHL2-203ENST00000457791 237 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 HMGB1P35-201ENST00000503360 598 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 RNU6-835P-201ENST00000516974 104 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 CENPUP1-201ENST00000526649 1202 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 MIR3941-201ENST00000582572 103 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 AC092747.3-201ENST00000603769 301 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 AC092954.2-201ENST00000609103 430 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 AC091932.3-201ENST00000624223 323 ntBASIC1.92□□□□□ -2.1
NPIPA2E9PIF3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RNU4-40P-201ENST00000364351 143 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RNU6-546P-201ENST00000383991 107 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RNU6-611P-201ENST00000384276 104 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RNU6-43P-201ENST00000384302 107 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 POLHP1-201ENST00000411806 470 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 HMGB3P2-201ENST00000411913 584 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 MTND3P16-201ENST00000452205 344 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RPL38P4-201ENST00000502376 214 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 SNORA14.1-201ENST00000516113 141 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RNU6-189P-201ENST00000516120 101 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 RNU6-314P-201ENST00000516574 104 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 Y_RNA.693-201ENST00000516641 110 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 CYCSP27-201ENST00000527643 293 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 MIR4769-201ENST00000584126 77 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 BNIP3P16-201ENST00000589779 534 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 AL121757.2-201ENST00000611223 313 ntBASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NPIPA2E9PIF3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 RNU6-743P-201ENST00000364151 106 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 RNU6-483P-201ENST00000384088 108 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 MIR518A2-201ENST00000384966 87 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 RPS29P13-201ENST00000402041 169 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 RNU6-1068P-201ENST00000410958 103 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 RPS15AP10-201ENST00000432472 382 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 snoU13.23-201ENST00000458863 104 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 AC019235.1-201ENST00000503847 207 ntBASIC1.9□□□□□ -2.11
NPIPA2E9PIF3 RPL39P5-202ENST00000512505 151 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms